RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 Q8N1Y9 231 aa9.59□□□□□ -0.87
ABCA3-201ENST00000301732 PATE2Q6UY27 113 aa9.59□□□□□ -0.87
ABCA3-201ENST00000301732 PYGO2Q9BRQ0 406 aa9.59□□□□□ -0.87
ABCA3-201ENST00000301732 VWA8A3KMH1 1905 aa9.59□□□□□ -0.87
ABCA3-201ENST00000301732 HIGD2BQ4VC39 106 aa9.59□□□□□ -0.87
ABCA3-201ENST00000301732 CCL24O00175 119 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 ETV2O00321 342 aaPredicted RBP9.58□□□□□ -0.88
ABCA3-201ENST00000301732 CSRP1P21291 193 aaKnown RBP9.58□□□□□ -0.88
ABCA3-201ENST00000301732 APOC4P55056 127 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 HERV-K104P63124 156 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
ABCA3-201ENST00000301732 PRR4Q16378 134 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 AJUBAQ96IF1 538 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 RHOHQ15669 191 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 CRIPAKQ8N1N5 446 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 SIVA1O15304 175 aa9.58□□□□□ -0.88
ABCA3-201ENST00000301732 IGHV4-30-2A0A087WSY4 118 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 C17orf82Q86X59 251 aaPredicted RBP9.57□□□□□ -0.88
ABCA3-201ENST00000301732 TM2D2Q9BX73 214 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 SBF1O95248 1867 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 IGKV2-24A0A0C4DH68 120 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 WDR90Q96KV7 1748 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 TSC2P49815 1807 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 TEX49A0A1B0GTD5 131 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 MIR7-3HGQ8N6C7 128 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 SIRPDQ9H106 197 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 TRBV12-3P01733 135 aa9.57□□□□□ -0.88
ABCA3-201ENST00000301732 MRPL36Q9P0J6 103 aaKnown RBP9.56□□□□□ -0.88
ABCA3-201ENST00000301732 MDFICQ9P1T7 246 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 IGKV4-1P06312 121 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 TP53TG3Q9ULZ0 132 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 TICRRQ7Z2Z1 1910 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 COX7A2LO14548 114 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 TCL1BO95988 128 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
ABCA3-201ENST00000301732 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
ABCA3-201ENST00000301732 J3KT08 172 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 K7EQD1 137 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
ABCA3-201ENST00000301732 NOTCH2Q04721 2471 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 SPATA12Q7Z6I5 190 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 TEN1Q86WV5 123 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 NCKAP5O14513 1909 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 G3V4G9 280 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 UBE2AP49459 152 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 DEFB135Q30KP9 77 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 NFE4Q86UQ8 179 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 ATP6V0E2Q8NHE4 81 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 FAM215AQ9Y5M1 114 aa9.55□□□□□ -0.88
ABCA3-201ENST00000301732 NDUFC2O95298 119 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 ZFHX2Q9C0A1 2572 aaPredicted RBP9.54□□□□□ -0.88
ABCA3-201ENST00000301732 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 C11orf53Q8IXP5 236 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 DCANP1Q8TF63 244 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 GP9P14770 177 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 POM121L12Q8N7R1 296 aa9.54□□□□□ -0.88
ABCA3-201ENST00000301732 SONP18583 2426 aaKnown RBP9.54□□□□□ -0.88
ABCA3-201ENST00000301732 MP68P56378 58 aa9.53□□□□□ -0.88
ABCA3-201ENST00000301732 SPG11Q96JI7 2443 aa9.53□□□□□ -0.88
ABCA3-201ENST00000301732 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
ABCA3-201ENST00000301732 RNF152Q8N8N0 203 aa9.53□□□□□ -0.88
ABCA3-201ENST00000301732 MED12LQ86YW9 2145 aa9.53□□□□□ -0.88
ABCA3-201ENST00000301732 NCOR1P1Q9H4R4 102 aa9.52□□□□□ -0.88
ABCA3-201ENST00000301732 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 IGHV4-31P0DP07 118 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 IGHV7-81A0A0B4J1V7 117 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 IGHV4-61A0A0C4DH41 118 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 K7EIM0 57 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 ATOX1O00244 68 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 WISP2O76076 250 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 Q8TCH9 128 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 WT1P19544 449 aaPredicted RBP9.52□□□□□ -0.89
ABCA3-201ENST00000301732 SLX1AQ9BQ83 275 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 U3KQA8 63 aa9.52□□□□□ -0.89
ABCA3-201ENST00000301732 C10orf105Q8TEF2 133 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 SNURFQ9Y675 71 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 WFDC10BQ8IUB3 73 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 I3L2K1 104 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 CFPP27918 469 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 HHLA3Q9XRX5 114 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 IL15RAQ13261 267 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 Q6ZUT4 128 aa9.51□□□□□ -0.89
ABCA3-201ENST00000301732 FREM1Q5H8C1 2179 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 IGKV1-17P01599 117 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 A8MZ25 164 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 HRCT1Q6UXD1 115 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
ABCA3-201ENST00000301732 LINC00322Q6ZN03 302 aaPredicted RBP9.49□□□□□ -0.89
ABCA3-201ENST00000301732 TMEM263Q8WUH6 116 aaKnown RBP9.49□□□□□ -0.89
ABCA3-201ENST00000301732 LINC00526Q96FQ7 95 aa9.49□□□□□ -0.89
ABCA3-201ENST00000301732 HIGD2AQ9BW72 106 aa9.49□□□□□ -0.89
ABCA3-201ENST00000301732 ODF1Q14990 250 aa9.49□□□□□ -0.89
ABCA3-201ENST00000301732 NCOA6Q14686 2063 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms