RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SNAI2O43623 268 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 SSBP4Q9BWG4 385 aaPredicted RBP12.45□□□□□ -0.42
SPSB3-201ENST00000301717 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
SPSB3-201ENST00000301717 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 SIVA1O15304 175 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 CIDEAO60543 219 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 ATP6V1G1O75348 118 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 P01737 135 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 GAGE1Q13065 139 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 GAGE4Q13068 117 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 GAGE5Q13069 117 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 NUDT10Q8NFP7 164 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 NUDT11Q96G61 164 aa12.45□□□□□ -0.42
SPSB3-201ENST00000301717 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
SPSB3-201ENST00000301717 IGLC6P0CF74 106 aa12.44□□□□□ -0.42
SPSB3-201ENST00000301717 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
SPSB3-201ENST00000301717 PKD1P98161 4303 aa12.43□□□□□ -0.42
SPSB3-201ENST00000301717 SRP19P09132 144 aaKnown RBP12.43□□□□□ -0.42
SPSB3-201ENST00000301717 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
SPSB3-201ENST00000301717 C6orf223Q8N319 242 aa12.43□□□□□ -0.42
SPSB3-201ENST00000301717 PKHD1P08F94 4074 aa12.42□□□□□ -0.42
SPSB3-201ENST00000301717 C9JQL5 133 aa12.42□□□□□ -0.42
SPSB3-201ENST00000301717 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
SPSB3-201ENST00000301717 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
SPSB3-201ENST00000301717 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
SPSB3-201ENST00000301717 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
SPSB3-201ENST00000301717 MSRB1Q9NZV6 116 aa12.42□□□□□ -0.42
SPSB3-201ENST00000301717 RHODO00212 210 aa12.41□□□□□ -0.42
SPSB3-201ENST00000301717 LINC00336Q6ZUF6 198 aa12.41□□□□□ -0.42
SPSB3-201ENST00000301717 TNFRSF18Q9Y5U5 241 aa12.41□□□□□ -0.42
SPSB3-201ENST00000301717 A0A1B0GVY2 172 aa12.4□□□□□ -0.42
SPSB3-201ENST00000301717 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
SPSB3-201ENST00000301717 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
SPSB3-201ENST00000301717 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
SPSB3-201ENST00000301717 SMIM7Q9BQ49 75 aa12.4□□□□□ -0.42
SPSB3-201ENST00000301717 RPS20P60866 119 aaKnown RBP12.39□□□□□ -0.43
SPSB3-201ENST00000301717 TNP2Q05952 138 aa12.39□□□□□ -0.43
SPSB3-201ENST00000301717 ZNF56Q15929 161 aa12.39□□□□□ -0.43
SPSB3-201ENST00000301717 LYZL1Q6UWQ5 148 aa12.39□□□□□ -0.43
SPSB3-201ENST00000301717 RPP21Q9H633 154 aaKnown RBP12.39□□□□□ -0.43
SPSB3-201ENST00000301717 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
SPSB3-201ENST00000301717 LINC00315P59091 139 aa12.38□□□□□ -0.43
SPSB3-201ENST00000301717 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
SPSB3-201ENST00000301717 DNAH11Q96DT5 4516 aa12.38□□□□□ -0.43
SPSB3-201ENST00000301717 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 KIF25-AS1Q9Y6Z4 181 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 ZNF727A8MUV8 499 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 OR10J3Q5JRS4 329 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 LINC01551Q86U37 167 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 Q8N3U1 123 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 GTSF1LQ9H1H1 148 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
SPSB3-201ENST00000301717 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
SPSB3-201ENST00000301717 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
SPSB3-201ENST00000301717 TIRAPP58753 221 aa12.36□□□□□ -0.43
SPSB3-201ENST00000301717 GTSF1Q8WW33 167 aa12.36□□□□□ -0.43
SPSB3-201ENST00000301717 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
SPSB3-201ENST00000301717 F5H697 171 aa12.35□□□□□ -0.43
SPSB3-201ENST00000301717 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
SPSB3-201ENST00000301717 MGPP08493 103 aa12.35□□□□□ -0.43
SPSB3-201ENST00000301717 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
SPSB3-201ENST00000301717 LELP1Q5T871 98 aa12.35□□□□□ -0.43
SPSB3-201ENST00000301717 NTF3P20783 257 aa12.34□□□□□ -0.43
SPSB3-201ENST00000301717 EVI2AP22794 236 aa12.34□□□□□ -0.43
SPSB3-201ENST00000301717 CTRLP40313 264 aa12.34□□□□□ -0.43
SPSB3-201ENST00000301717 ERVFC1-1P60608 527 aa12.34□□□□□ -0.43
SPSB3-201ENST00000301717 RAB4BP61018 213 aa12.34□□□□□ -0.43
SPSB3-201ENST00000301717 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
SPSB3-201ENST00000301717 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
SPSB3-201ENST00000301717 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
SPSB3-201ENST00000301717 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
SPSB3-201ENST00000301717 IGHV3-30-3P0DP02 117 aa12.33□□□□□ -0.44
SPSB3-201ENST00000301717 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
SPSB3-201ENST00000301717 CACNG7P62955 275 aa12.33□□□□□ -0.44
SPSB3-201ENST00000301717 TRAV8-6A0A0B4J262 113 aa12.32□□□□□ -0.44
SPSB3-201ENST00000301717 F2Z2F3 143 aa12.32□□□□□ -0.44
SPSB3-201ENST00000301717 NDUFS6O75380 124 aaKnown RBP12.32□□□□□ -0.44
SPSB3-201ENST00000301717 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
SPSB3-201ENST00000301717 Q6ZRN7 208 aaPredicted RBP12.32□□□□□ -0.44
SPSB3-201ENST00000301717 FAM231DQ6ZW35 169 aa12.32□□□□□ -0.44
SPSB3-201ENST00000301717 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
SPSB3-201ENST00000301717 UBE2D3P61077 147 aa12.31□□□□□ -0.44
SPSB3-201ENST00000301717 UBE2D2P62837 147 aa12.31□□□□□ -0.44
SPSB3-201ENST00000301717 RPL36AP83881 106 aaKnown RBP12.31□□□□□ -0.44
SPSB3-201ENST00000301717 TWIST1Q15672 202 aa12.31□□□□□ -0.44
SPSB3-201ENST00000301717 RPL36ALQ969Q0 106 aaKnown RBP12.31□□□□□ -0.44
SPSB3-201ENST00000301717 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
SPSB3-201ENST00000301717 DYNC1H1Q14204 4646 aaKnown RBP12.31□□□□□ -0.44
SPSB3-201ENST00000301717 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
SPSB3-201ENST00000301717 S100A1P23297 94 aa12.3□□□□□ -0.44
SPSB3-201ENST00000301717 FOXA3P55318 350 aaPredicted RBP12.3□□□□□ -0.44
SPSB3-201ENST00000301717 PEA15Q15121 130 aa12.3□□□□□ -0.44
SPSB3-201ENST00000301717 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
SPSB3-201ENST00000301717 LINC00862A6NCI5 91 aa12.29□□□□□ -0.44
SPSB3-201ENST00000301717 RPL23P62829 140 aaKnown RBP12.29□□□□□ -0.44
SPSB3-201ENST00000301717 LINC01556Q5JQF7 62 aa12.29□□□□□ -0.44
SPSB3-201ENST00000301717 OR10G8Q8NGN5 311 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms