RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 CRYGDP07320 174 aa8.17□□□□□ -1.1
CDK5-201ENST00000297518 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
CDK5-201ENST00000297518 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
CDK5-201ENST00000297518 LY96Q9Y6Y9 160 aa8.17□□□□□ -1.1
CDK5-201ENST00000297518 PKD1P98161 4303 aa8.17□□□□□ -1.1
CDK5-201ENST00000297518 TRAV9-2A0A087WT02 112 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 GAGE12JA6NER3 117 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 DNAH10OSP0CZ25 163 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 LINC00694P0DN24 101 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 LINC00315P59091 139 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 RPS20P60866 119 aaKnown RBP8.16□□□□□ -1.1
CDK5-201ENST00000297518 TNP2Q05952 138 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 GAGE1Q13065 139 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 GAGE4Q13068 117 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 GAGE5Q13069 117 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 GAGE13Q4V321 117 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
CDK5-201ENST00000297518 MUC21A0A0G2JKD1 596 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 MUC21A0A140T8X8 626 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 XKRY2A2RUG3 117 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 K7EP13 123 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 P01737 135 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 GZMBP10144 247 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 EVI2AP22794 236 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 TOR2AQ5JU69 321 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 Q9UF83 564 aa8.15□□□□□ -1.1
CDK5-201ENST00000297518 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
CDK5-201ENST00000297518 IGLC6P0CF74 106 aa8.14□□□□□ -1.11
CDK5-201ENST00000297518 OR10J3Q5JRS4 329 aa8.14□□□□□ -1.11
CDK5-201ENST00000297518 LELP1Q5T871 98 aa8.14□□□□□ -1.11
CDK5-201ENST00000297518 TPPP3Q9BW30 176 aa8.14□□□□□ -1.11
CDK5-201ENST00000297518 EIF5A2Q9GZV4 153 aaKnown RBP8.14□□□□□ -1.11
CDK5-201ENST00000297518 IGHV3-38A0A0C4DH36 116 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 K7EN84 100 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 NDUFS6O75380 124 aaKnown RBP8.13□□□□□ -1.11
CDK5-201ENST00000297518 CEBPGP53567 150 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 RAB4BP61018 213 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 SSTP61278 116 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 ZNF56Q15929 161 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 NUDT10Q8NFP7 164 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 NUDT11Q96G61 164 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 FAM210AQ96ND0 272 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 AP1S3Q96PC3 154 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
CDK5-201ENST00000297518 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
CDK5-201ENST00000297518 Q6ZRN7 208 aaPredicted RBP8.12□□□□□ -1.11
CDK5-201ENST00000297518 NFE4Q86UQ8 179 aa8.12□□□□□ -1.11
CDK5-201ENST00000297518 C10orf126Q8N4M7 172 aa8.12□□□□□ -1.11
CDK5-201ENST00000297518 A0A087WWC5 75 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 F2Z2F3 143 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 SMIM17P0DL12 118 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 CACNG7P62955 275 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 RPL36AP83881 106 aaKnown RBP8.11□□□□□ -1.11
CDK5-201ENST00000297518 TEX261Q6UWH6 196 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 RPL36ALQ969Q0 106 aaKnown RBP8.11□□□□□ -1.11
CDK5-201ENST00000297518 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
CDK5-201ENST00000297518 RPP21Q9H633 154 aaKnown RBP8.11□□□□□ -1.11
CDK5-201ENST00000297518 MSRB1Q9NZV6 116 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 TNFRSF18Q9Y5U5 241 aa8.11□□□□□ -1.11
CDK5-201ENST00000297518 TRBV7-3A0A075B6L6 115 aa8.1□□□□□ -1.11
CDK5-201ENST00000297518 LYZL1Q6UWQ5 148 aa8.1□□□□□ -1.11
CDK5-201ENST00000297518 OR10G8Q8NGN5 311 aa8.1□□□□□ -1.11
CDK5-201ENST00000297518 SMIM7Q9BQ49 75 aa8.1□□□□□ -1.11
CDK5-201ENST00000297518 KIF25-AS1Q9Y6Z4 181 aa8.1□□□□□ -1.11
CDK5-201ENST00000297518 F5H697 171 aa8.09□□□□□ -1.11
CDK5-201ENST00000297518 SRP19P09132 144 aaKnown RBP8.09□□□□□ -1.11
CDK5-201ENST00000297518 CTRLP40313 264 aa8.09□□□□□ -1.11
CDK5-201ENST00000297518 UBE2D3P61077 147 aa8.09□□□□□ -1.11
CDK5-201ENST00000297518 UBE2D2P62837 147 aa8.09□□□□□ -1.11
CDK5-201ENST00000297518 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 GATCO43716 136 aaKnown RBP8.08□□□□□ -1.12
CDK5-201ENST00000297518 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 IGHV3-33P01772 117 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 MGPP08493 103 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 IGHV3-30-3P0DP02 117 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 FAM231DQ6ZW35 169 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 NEXN-AS1Q8NBZ9 246 aa8.08□□□□□ -1.12
CDK5-201ENST00000297518 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
CDK5-201ENST00000297518 NTF3P20783 257 aa8.07□□□□□ -1.12
CDK5-201ENST00000297518 ERVFC1-1P60608 527 aa8.07□□□□□ -1.12
CDK5-201ENST00000297518 LINC01551Q86U37 167 aa8.07□□□□□ -1.12
CDK5-201ENST00000297518 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
CDK5-201ENST00000297518 C16orf90A8MZG2 172 aa8.06□□□□□ -1.12
CDK5-201ENST00000297518 H7C1H1 209 aa8.06□□□□□ -1.12
CDK5-201ENST00000297518 LAGE3Q14657 143 aa8.06□□□□□ -1.12
CDK5-201ENST00000297518 SPATA12Q7Z6I5 190 aa8.06□□□□□ -1.12
CDK5-201ENST00000297518 Q8N3U1 123 aa8.06□□□□□ -1.12
CDK5-201ENST00000297518 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.06□□□□□ -1.12
CDK5-201ENST00000297518 DPH3P1Q9H4G8 78 aa8.06□□□□□ -1.12
CDK5-201ENST00000297518 Q9HAA7 133 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms