RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 GOLT1BQ9Y3E0 138 aa12.91□□□□□ -0.34
CCDC78-201ENST00000293889 IGHV3OR16-12A0A075B7B8 117 aa12.9□□□□□ -0.34
CCDC78-201ENST00000293889 IGKV3D-20A0A0C4DH25 116 aa12.9□□□□□ -0.34
CCDC78-201ENST00000293889 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
CCDC78-201ENST00000293889 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
CCDC78-201ENST00000293889 COL5A1-AS1Q5SY13 56 aa12.9□□□□□ -0.34
CCDC78-201ENST00000293889 TMEM208Q9BTX3 173 aa12.9□□□□□ -0.34
CCDC78-201ENST00000293889 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
CCDC78-201ENST00000293889 IGHV1-24A0A0C4DH33 117 aa12.89□□□□□ -0.35
CCDC78-201ENST00000293889 PRM2P04554 102 aa12.89□□□□□ -0.35
CCDC78-201ENST00000293889 LINC01559Q495D7 138 aa12.89□□□□□ -0.35
CCDC78-201ENST00000293889 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
CCDC78-201ENST00000293889 ZNF575Q86XF7 245 aa12.89□□□□□ -0.35
CCDC78-201ENST00000293889 TMSB15BA0A087X1C1 80 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 DLEU1O43261 78 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 HTN1P15515 57 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 HNRNPA3P51991 378 aaKnown RBP12.88□□□□□ -0.35
CCDC78-201ENST00000293889 PET117Q6UWS5 81 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 U3KQK5 164 aa12.88□□□□□ -0.35
CCDC78-201ENST00000293889 GNRH2O43555 120 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 Q6ZN92 141 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 SBSPONQ8IVN8 264 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 RNF183Q96D59 192 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 LINC00467Q9BRT7 94 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 ST20Q9HBF5 79 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 LAMTOR2Q9Y2Q5 125 aa12.87□□□□□ -0.35
CCDC78-201ENST00000293889 COL7A1Q02388 2944 aa12.86□□□□□ -0.35
CCDC78-201ENST00000293889 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
CCDC78-201ENST00000293889 ARMS2P0C7Q2 107 aa12.86□□□□□ -0.35
CCDC78-201ENST00000293889 ZNF25P17030 456 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-201ENST00000293889 SPATA12Q7Z6I5 190 aa12.86□□□□□ -0.35
CCDC78-201ENST00000293889 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
CCDC78-201ENST00000293889 TGP01266 2768 aa12.86□□□□□ -0.35
CCDC78-201ENST00000293889 CBY3A6NI87 242 aa12.85□□□□□ -0.35
CCDC78-201ENST00000293889 RPS20P60866 119 aaKnown RBP12.85□□□□□ -0.35
CCDC78-201ENST00000293889 DNAH9Q9NYC9 4486 aa12.85□□□□□ -0.35
CCDC78-201ENST00000293889 AZU1P20160 251 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 HSPB8Q9UJY1 196 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 SPRY2O43597 315 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 OR11H2Q8NH07 326 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 RETNQ9HD89 108 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 X6R8D5 127 aa12.84□□□□□ -0.35
CCDC78-201ENST00000293889 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.36
CCDC78-201ENST00000293889 MDFICQ9P1T7 246 aa12.83□□□□□ -0.36
CCDC78-201ENST00000293889 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
CCDC78-201ENST00000293889 ASIPP42127 132 aa12.82□□□□□ -0.36
CCDC78-201ENST00000293889 MAJINQ3KP22 176 aa12.82□□□□□ -0.36
CCDC78-201ENST00000293889 ATOH7Q8N100 152 aa12.82□□□□□ -0.36
CCDC78-201ENST00000293889 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
CCDC78-201ENST00000293889 TP53TG1Q9Y2A0 90 aa12.82□□□□□ -0.36
CCDC78-201ENST00000293889 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
CCDC78-201ENST00000293889 RRN3P1Q2M238 152 aa12.81□□□□□ -0.36
CCDC78-201ENST00000293889 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
CCDC78-201ENST00000293889 FAM104BQ5XKR9 115 aa12.81□□□□□ -0.36
CCDC78-201ENST00000293889 STPG4Q8N801 248 aa12.81□□□□□ -0.36
CCDC78-201ENST00000293889 SMIM9A6NGZ8 99 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 LINC00173Q6ZV60 143 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
CCDC78-201ENST00000293889 CNFNQ9BYD5 112 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
CCDC78-201ENST00000293889 S100A4P26447 101 aaKnown RBP12.8□□□□□ -0.36
CCDC78-201ENST00000293889 G0S2P27469 103 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 C11orf72Q8NBR9 251 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 TMEM263Q8WUH6 116 aaKnown RBP12.8□□□□□ -0.36
CCDC78-201ENST00000293889 TM2D3Q9BRN9 247 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 AP5S1Q9NUS5 200 aa12.8□□□□□ -0.36
CCDC78-201ENST00000293889 TIMM8BQ9Y5J9 83 aaPredicted RBP12.8□□□□□ -0.36
CCDC78-201ENST00000293889 H3BVH4 76 aa12.79□□□□□ -0.36
CCDC78-201ENST00000293889 LYZL1Q6UWQ5 148 aa12.79□□□□□ -0.36
CCDC78-201ENST00000293889 FER1L6-AS1Q8NA97 138 aa12.79□□□□□ -0.36
CCDC78-201ENST00000293889 ORAOV1Q8WV07 137 aa12.79□□□□□ -0.36
CCDC78-201ENST00000293889 TPPP3Q9BW30 176 aa12.79□□□□□ -0.36
CCDC78-201ENST00000293889 ZNF415Q09FC8 603 aa12.78□□□□□ -0.36
CCDC78-201ENST00000293889 OR10AG1Q8NH19 301 aa12.78□□□□□ -0.36
CCDC78-201ENST00000293889 C16orf74Q96GX8 76 aa12.78□□□□□ -0.36
CCDC78-201ENST00000293889 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
CCDC78-201ENST00000293889 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.36
CCDC78-201ENST00000293889 BATFQ16520 125 aa12.77□□□□□ -0.36
CCDC78-201ENST00000293889 C9orf85Q96MD7 179 aa12.77□□□□□ -0.36
CCDC78-201ENST00000293889 SPATA25Q9BR10 227 aa12.77□□□□□ -0.36
CCDC78-201ENST00000293889 SCRT2Q9NQ03 307 aa12.77□□□□□ -0.36
CCDC78-201ENST00000293889 IGHV4-28A0A0C4DH34 117 aa12.77□□□□□ -0.37
CCDC78-201ENST00000293889 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
CCDC78-201ENST00000293889 MED14OSP0DP75 135 aa12.77□□□□□ -0.37
CCDC78-201ENST00000293889 MIFP14174 115 aa12.77□□□□□ -0.37
CCDC78-201ENST00000293889 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
CCDC78-201ENST00000293889 Q8NAQ8 132 aa12.77□□□□□ -0.37
CCDC78-201ENST00000293889 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
CCDC78-201ENST00000293889 MUC21A0A0G2JKD1 596 aa12.76□□□□□ -0.37
CCDC78-201ENST00000293889 MUC21A0A140T8X8 626 aa12.76□□□□□ -0.37
CCDC78-201ENST00000293889 SNAI2O43623 268 aa12.76□□□□□ -0.37
CCDC78-201ENST00000293889 ORMDL3Q8N138 153 aa12.76□□□□□ -0.37
CCDC78-201ENST00000293889 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
CCDC78-201ENST00000293889 DEFB4AO15263 64 aa12.75□□□□□ -0.37
CCDC78-201ENST00000293889 EMP1P54849 157 aa12.75□□□□□ -0.37
CCDC78-201ENST00000293889 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms