RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 Q6ZQT7 251 aa8.4□□□□□ -1.06
PKNOX1-201ENST00000291547 C14orf132Q9NPU4 83 aa8.4□□□□□ -1.06
PKNOX1-201ENST00000291547 DOPEY1Q5JWR5 2465 aa8.4□□□□□ -1.06
PKNOX1-201ENST00000291547 LENEPQ9Y5L5 61 aa8.4□□□□□ -1.07
PKNOX1-201ENST00000291547 FAM208BQ5VWN6 2430 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 HEATR5AQ86XA9 2040 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 NDUFB1O75438 58 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 ATP5G1P05496 136 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 MSRB1Q9NZV6 116 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 TMEM131Q92545 1883 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 K7ENP7 123 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 PROK2Q9HC23 129 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 Q9HAA7 133 aa8.39□□□□□ -1.07
PKNOX1-201ENST00000291547 A0A1W2PNU3 283 aaPredicted RBP8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 WISP1O95388 367 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 RSPO1Q2MKA7 263 aaPredicted RBP8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 PCDH15Q96QU1 1955 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 ATG2AQ2TAZ0 1938 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 CRYGBP07316 175 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 DAND5Q8N907 189 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 OTOGLQ3ZCN5 2332 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
PKNOX1-201ENST00000291547 ZNF503-AS2A6NEH8 195 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 Q8N976 141 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 SPRY4Q9C004 299 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 SONP18583 2426 aaKnown RBP8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 LECT2O14960 151 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 ELANEP08246 267 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 MYO18BQ8IUG5 2567 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
PKNOX1-201ENST00000291547 TIMM17AQ99595 171 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 SORL1Q92673 2214 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 CACNA1AO00555 2505 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 E9PLD3 99 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 IGLV2-23P01705 113 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 RPL18AQ02543 176 aaKnown RBP8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 PRR30Q53SZ7 412 aaPredicted RBP8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 GTSF1Q8WW33 167 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 JMJD7-PLA2G4BH0Y9G9 81 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 ZNF524Q96C55 264 aa8.36□□□□□ -1.07
PKNOX1-201ENST00000291547 H3BT86 120 aa8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 LGALS9O00182 355 aa8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 SHISA2Q6UWI4 295 aa8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 SPG11Q96JI7 2443 aa8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 WT1P19544 449 aaPredicted RBP8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 CLEC2BQ92478 149 aa8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
PKNOX1-201ENST00000291547 COX7A2LO14548 114 aa8.34□□□□□ -1.07
PKNOX1-201ENST00000291547 RPL39P62891 51 aaKnown RBP8.34□□□□□ -1.07
PKNOX1-201ENST00000291547 CUL9Q8IWT3 2517 aa8.34□□□□□ -1.07
PKNOX1-201ENST00000291547 Q6Q795 121 aa8.34□□□□□ -1.07
PKNOX1-201ENST00000291547 ZNF503Q96F45 646 aa8.34□□□□□ -1.07
PKNOX1-201ENST00000291547 GP9P14770 177 aa8.34□□□□□ -1.08
PKNOX1-201ENST00000291547 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.08
PKNOX1-201ENST00000291547 MED13Q9UHV7 2174 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 EML6Q6ZMW3 1958 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 PROP1O75360 226 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 LRP4O75096 1905 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 H3BUA1 57 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 M0QXV9 152 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 SP5Q6BEB4 398 aaPredicted RBP8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 DKK4Q9UBT3 224 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 COL4A2P08572 1712 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 USP34Q70CQ2 3546 aa8.33□□□□□ -1.08
PKNOX1-201ENST00000291547 IGLV1-44P01699 117 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 GYPEP15421 78 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 KAAG1Q9UBP8 84 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 RNF138Q8WVD3 245 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 Q96MF0 132 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 CENPVL3A0A0U1RRI6 287 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 IGKV1-17P01599 117 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 BDP1A6H8Y1 2624 aa8.32□□□□□ -1.08
PKNOX1-201ENST00000291547 TIRAPP58753 221 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 PATE2Q6UY27 113 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 APRG1Q8IVJ8 170 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 IGLV3-1P01715 115 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 ACACBO00763 2458 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 LINC00643Q86TS7 51 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 H3BQ85 93 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 TM2D2Q9BX73 214 aa8.31□□□□□ -1.08
PKNOX1-201ENST00000291547 K7EQD1 137 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 LINC00310P59036 64 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 SMIM9A6NGZ8 99 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 J3QLI3 93 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 NCR3O14931 201 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 DEFB136Q30KP8 78 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 UQCRQO14949 82 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 NPBQ8NG41 125 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms