RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 PGPEP1LA6NFU8 196 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 M0R2P5 195 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 GCGP01275 180 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 IGLV2-11P01706 119 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 GYPEP15421 78 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 S100PP25815 95 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 BAGE2Q86Y30 109 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 WFDC10BQ8IUB3 73 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 OR10G8Q8NGN5 311 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 SFRP2Q96HF1 295 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 IMMP2LQ96T52 175 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 BIN3Q9NQY0 253 aa6.48□□□□□ -1.37
HMHB1-201ENST00000289448 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
HMHB1-201ENST00000289448 K7EN84 100 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 IGLV2-8P01709 118 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 RAB5AP20339 215 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 SRIP30626 198 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 ELOBQ15370 118 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 MAPKAPK5-AS1Q8N8E1 139 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 TMEM75Q8N9X5 138 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 OR4C5Q8NGB2 326 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 BTF3L4Q96K17 158 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 LINC00479Q96M42 142 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 OSTCQ9NRP0 149 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 PSG8Q9UQ74 426 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
HMHB1-201ENST00000289448 TRBV24-1A0A075B6N3 115 aa6.46□□□□□ -1.38
HMHB1-201ENST00000289448 LTAP01374 205 aa6.46□□□□□ -1.38
HMHB1-201ENST00000289448 PFN1P07737 140 aaKnown RBP6.46□□□□□ -1.38
HMHB1-201ENST00000289448 MGST1P10620 155 aaKnown RBP6.46□□□□□ -1.38
HMHB1-201ENST00000289448 GATA1P15976 413 aaPredicted RBP6.46□□□□□ -1.38
HMHB1-201ENST00000289448 ERVFC1-1P60608 527 aa6.46□□□□□ -1.38
HMHB1-201ENST00000289448 KCNIP4Q6PIL6 250 aa6.46□□□□□ -1.38
HMHB1-201ENST00000289448 Q86TA4 180 aa6.46□□□□□ -1.38
HMHB1-201ENST00000289448 HERC1Q15751 4861 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 ORM1P02763 201 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 DNAH10OSP0CZ25 163 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 FLI1Q01543 452 aaPredicted RBP6.45□□□□□ -1.38
HMHB1-201ENST00000289448 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 CFAP126Q5VTH2 177 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 FAM231DQ6ZW35 169 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 PRNTQ86SH4 94 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 KCNS1Q96KK3 526 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 C9orf85Q96MD7 179 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 MLST8Q9BVC4 326 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 ZFP30Q9Y2G7 519 aa6.45□□□□□ -1.38
HMHB1-201ENST00000289448 TGIF2-C20orf24A0A0A6YYL0 155 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 C1orf196B1AJZ1 125 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 RS1O15537 224 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 Q8N1X5 172 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 SLC25A29Q8N8R3 303 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 NHLRC2Q8NBF2 726 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 IL36BQ9NZH7 164 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 MSRB1Q9NZV6 116 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 V9GYV3 84 aa6.44□□□□□ -1.38
HMHB1-201ENST00000289448 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
HMHB1-201ENST00000289448 TRAV9-2A0A087WT02 112 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 A0A087WTM6 91 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 CXCL1P09341 107 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 RNASE3P12724 160 aaKnown RBP6.43□□□□□ -1.38
HMHB1-201ENST00000289448 RPS10P46783 165 aaKnown RBP6.43□□□□□ -1.38
HMHB1-201ENST00000289448 RAB5BP61020 215 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 SMUG1Q53HV7 270 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 SAPCD1Q5SSQ6 148 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 Q6ZSN1 163 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 RNASE7Q9H1E1 156 aaKnown RBP6.43□□□□□ -1.38
HMHB1-201ENST00000289448 SCRT2Q9NQ03 307 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
HMHB1-201ENST00000289448 IGKV3D-20A0A0C4DH25 116 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
HMHB1-201ENST00000289448 CRYGDP07320 174 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 EVI2AP22794 236 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 TIRAPP58753 221 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 RPL19P84098 196 aaKnown RBP6.42□□□□□ -1.38
HMHB1-201ENST00000289448 CT83Q5H943 113 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 COX8CQ7Z4L0 72 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 NUDT10Q8NFP7 164 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 PTH2Q96A98 100 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 NUDT11Q96G61 164 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 Q9UF83 564 aa6.42□□□□□ -1.38
HMHB1-201ENST00000289448 MYCBP2O75592 4640 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 DNAH8Q96JB1 4490 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 TRBV6-4A0A1B0GX49 114 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 C19orf71A6NCJ1 209 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 K7EP13 123 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 P01737 135 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 CRIP1P50238 77 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 PRR27Q6MZM9 219 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 SH2D6Q7Z4S9 175 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 DAZAP1Q96EP5 407 aaKnown RBP6.41□□□□□ -1.38
HMHB1-201ENST00000289448 JPT2Q9H910 190 aa6.41□□□□□ -1.38
HMHB1-201ENST00000289448 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms