RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GAGE12HA6NDE8 117 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 H3BVH4 76 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 NDUFA4O00483 81 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 PSMB8P28062 276 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 C20orf78Q9BR46 151 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 NF1P21359 2839 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 BRI3O95415 125 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 SCGB3A1Q96QR1 104 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 ATP6V0BQ99437 205 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 AGRNO00468 2067 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 DEFB1P60022 68 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 SUMO2P61956 95 aaKnown RBP13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 C9orf139Q6ZV77 190 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
PDLIM3-201ENST00000284767 AKAP9Q99996 3911 aa13.77□□□□□ -0.2
PDLIM3-201ENST00000284767 GPHB5Q86YW7 130 aa13.77□□□□□ -0.21
PDLIM3-201ENST00000284767 ZNF702PQ9H963 129 aa13.77□□□□□ -0.21
PDLIM3-201ENST00000284767 PRO0461Q9UI25 63 aa13.77□□□□□ -0.21
PDLIM3-201ENST00000284767 Q6ZQT7 251 aa13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 C20orf173Q96LM9 149 aa13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 FASNP49327 2511 aaKnown RBP13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 SRD5A1P18405 259 aa13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 RPL11P62913 178 aaKnown RBP13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 ETDBQ3ZM63 59 aa13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
PDLIM3-201ENST00000284767 RASL10AQ92737 203 aa13.75□□□□□ -0.21
PDLIM3-201ENST00000284767 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
PDLIM3-201ENST00000284767 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
PDLIM3-201ENST00000284767 PRR9Q5T870 116 aa13.75□□□□□ -0.21
PDLIM3-201ENST00000284767 AMTNQ6UX39 209 aa13.75□□□□□ -0.21
PDLIM3-201ENST00000284767 M0R381 172 aa13.74□□□□□ -0.21
PDLIM3-201ENST00000284767 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
PDLIM3-201ENST00000284767 SH2D6Q7Z4S9 175 aa13.74□□□□□ -0.21
PDLIM3-201ENST00000284767 SMAGPQ0VAQ4 97 aa13.74□□□□□ -0.21
PDLIM3-201ENST00000284767 LINC00477Q96M19 166 aa13.74□□□□□ -0.21
PDLIM3-201ENST00000284767 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
PDLIM3-201ENST00000284767 MTORP42345 2549 aa13.73□□□□□ -0.21
PDLIM3-201ENST00000284767 BAALCQ8WXS3 180 aa13.73□□□□□ -0.21
PDLIM3-201ENST00000284767 MORN3Q6PF18 240 aaPredicted RBP13.73□□□□□ -0.21
PDLIM3-201ENST00000284767 CYSLTR1Q9Y271 337 aa13.73□□□□□ -0.21
PDLIM3-201ENST00000284767 TRAV21A0A0B4J279 112 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 TMEM238LA0A1B0GVL6 79 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 A6NJY4 79 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 C2orf66Q6UXQ4 117 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 PPP1R17O96001 155 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
PDLIM3-201ENST00000284767 ASIPP42127 132 aa13.71□□□□□ -0.21
PDLIM3-201ENST00000284767 ZFAND2AQ8N6M9 145 aa13.71□□□□□ -0.21
PDLIM3-201ENST00000284767 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.21
PDLIM3-201ENST00000284767 SCGB2A2Q13296 93 aa13.71□□□□□ -0.22
PDLIM3-201ENST00000284767 OVOL1O14753 267 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 S100A4P26447 101 aaKnown RBP13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 C18orf65Q6ZTR6 163 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 RPL39LQ96EH5 51 aaKnown RBP13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 PHLDA3Q9Y5J5 127 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 SETD2Q9BYW2 2564 aaPredicted RBP13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 PRSS29PA6NIE9 313 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 F6UB75 175 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 J3KRW8 73 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
PDLIM3-201ENST00000284767 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
PDLIM3-201ENST00000284767 SOCS3O14543 225 aa13.69□□□□□ -0.22
PDLIM3-201ENST00000284767 C14orf178Q8N769 122 aaPredicted RBP13.69□□□□□ -0.22
PDLIM3-201ENST00000284767 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
PDLIM3-201ENST00000284767 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
PDLIM3-201ENST00000284767 MRPL16Q9NX20 251 aaKnown RBP13.69□□□□□ -0.22
PDLIM3-201ENST00000284767 DLX4Q92988 240 aaPredicted RBP13.68□□□□□ -0.22
PDLIM3-201ENST00000284767 UBE2D1P51668 147 aa13.68□□□□□ -0.22
PDLIM3-201ENST00000284767 DEFB136Q30KP8 78 aa13.68□□□□□ -0.22
PDLIM3-201ENST00000284767 IGHV4OR15-8A0A075B7B6 117 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 A0A087WW49 117 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 LINC01549A6NIU2 74 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 MGPP08493 103 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 MTURNQ8N3F0 131 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 ANK3Q12955 4377 aaKnown RBP13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 A0A1B0GV72 72 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 APOMO95445 188 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
PDLIM3-201ENST00000284767 KRTAP1-1Q07627 177 aa13.66□□□□□ -0.22
PDLIM3-201ENST00000284767 ANXA2RQ3ZCQ2 193 aa13.66□□□□□ -0.22
PDLIM3-201ENST00000284767 CFAP126Q5VTH2 177 aa13.66□□□□□ -0.22
PDLIM3-201ENST00000284767 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
PDLIM3-201ENST00000284767 PAPPA-AS1Q5QFB9 102 aa13.66□□□□□ -0.22
PDLIM3-201ENST00000284767 FAM19A4Q96LR4 140 aa13.66□□□□□ -0.22
PDLIM3-201ENST00000284767 RPL32P62910 135 aaKnown RBP13.65□□□□□ -0.22
PDLIM3-201ENST00000284767 SRSF9Q13242 221 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDLIM3-201ENST00000284767 SORL1Q92673 2214 aa13.65□□□□□ -0.22
PDLIM3-201ENST00000284767 INSL3P51460 131 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms