RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 UBE2D2P62837 147 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 DEFB112Q30KQ8 113 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 C11orf21Q9P2W6 132 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 APOMO95445 188 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 TRGV3P03979 118 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 FAM110DQ8TAY7 271 aaPredicted RBP7.83□□□□□ -1.16
UPF3B-201ENST00000276201 DNAJC9-AS1A6NH13 148 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 PPP1R17O96001 155 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 HLA-DMBP28068 263 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 CRYBA4P53673 196 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 POM121L12Q8N7R1 296 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 AGPAT4-IT1Q9H0P7 198 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 U3KQE9 123 aa7.83□□□□□ -1.16
UPF3B-201ENST00000276201 NPFFO15130 113 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 UBE2E1P51965 193 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 MINOS1Q5TGZ0 78 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 MINOS1-NBL1R4GNA1 71 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 TRBV20-1A0A075B6N2 111 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 SAA4P35542 130 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
UPF3B-201ENST00000276201 NDPQ00604 133 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 TMEM78Q5T7P6 136 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.82□□□□□ -1.16
UPF3B-201ENST00000276201 PPDPFLQ8WWR9 84 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 DUX5Q96PT3 197 aa7.82□□□□□ -1.16
UPF3B-201ENST00000276201 TRAV8-2A0A0B4J237 113 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 SCGB3A1Q96QR1 104 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 AMTNQ6UX39 209 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 Q6YL49 198 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 LINC01600Q96MT4 127 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 S4R3C0 116 aa7.81□□□□□ -1.16
UPF3B-201ENST00000276201 STAB1Q9NY15 2570 aa7.8□□□□□ -1.16
UPF3B-201ENST00000276201 CLPSL1A2RUU4 121 aa7.8□□□□□ -1.16
UPF3B-201ENST00000276201 CD7P09564 240 aa7.8□□□□□ -1.16
UPF3B-201ENST00000276201 SUMO2P61956 95 aaKnown RBP7.8□□□□□ -1.16
UPF3B-201ENST00000276201 IGHV7-81A0A0B4J1V7 117 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 PRB4P10163 310 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-201ENST00000276201 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 PRADC1Q9BSG0 188 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 DPH3P1Q9H4G8 78 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 TRBV7-9A0A0J9YWB2 115 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 TSPAN13O95857 204 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
UPF3B-201ENST00000276201 PPIFP30405 207 aaKnown RBP7.79□□□□□ -1.16
UPF3B-201ENST00000276201 SPANXN1Q5VSR9 72 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 IGFL4Q6B9Z1 124 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 RASL10AQ92737 203 aa7.79□□□□□ -1.16
UPF3B-201ENST00000276201 IGHV4-59P01825 116 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 INSL3P51460 131 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 GEMIN7Q9H840 131 aaKnown RBP7.78□□□□□ -1.16
UPF3B-201ENST00000276201 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 NXPH4O95158 308 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 Q6ZUT4 128 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 TMEM86BQ8N661 226 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 LINC00477Q96M19 166 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 UFC1Q9Y3C8 167 aa7.78□□□□□ -1.16
UPF3B-201ENST00000276201 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 HERVK_113P61574 105 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 ATP5G2Q06055 141 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 HES1Q14469 280 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 Q8N9W7 124 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 IGHV4OR15-8A0A075B7B6 117 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 A0A087WW49 117 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 TRBV7-1A0A0A6YYK4 115 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 PRSS29PA6NIE9 313 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 CLEC3BP05452 202 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 SPINK8P0C7L1 97 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 NFE4Q86UQ8 179 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 RNF182Q8N6D2 247 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 SPATA3Q8NHX4 192 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 TMEM141Q96I45 108 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 METTL26Q96S19 204 aa7.77□□□□□ -1.17
UPF3B-201ENST00000276201 IGHV3-23P01764 117 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 NDUFA11Q86Y39 141 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 CARD19Q96LW7 228 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 TENM1Q9UKZ4 2725 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 TRAV26-1A0A087WT03 109 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 TRAV21A0A0B4J279 112 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 A0A0J9YY99 117 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 TMEM89A2RUT3 159 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 C15orf32Q32M92 178 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 EEF1AKMT3Q96AZ1 226 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 CLUHP3Q96NS8 147 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 ERG28Q9UKR5 140 aa7.76□□□□□ -1.17
UPF3B-201ENST00000276201 C11orf86A6NJI1 115 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 H3BVH4 76 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 OVOL1O14753 267 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
UPF3B-201ENST00000276201 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms