RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
SHPRH-201ENST00000275233 CFC1BP0CG36 223 aa9.15□□□□□ -0.94
SHPRH-201ENST00000275233 CFC1P0CG37 223 aa9.15□□□□□ -0.94
SHPRH-201ENST00000275233 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
SHPRH-201ENST00000275233 MRPL52Q86TS9 123 aaKnown RBP9.15□□□□□ -0.94
SHPRH-201ENST00000275233 MRPL36Q9P0J6 103 aaKnown RBP9.15□□□□□ -0.94
SHPRH-201ENST00000275233 C2orf16Q68DN1 1984 aa9.15□□□□□ -0.94
SHPRH-201ENST00000275233 UNQ9165/PRO28630Q6UXU0 137 aa9.15□□□□□ -0.95
SHPRH-201ENST00000275233 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.95
SHPRH-201ENST00000275233 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.95
SHPRH-201ENST00000275233 HERV-K104P63124 156 aa9.15□□□□□ -0.95
SHPRH-201ENST00000275233 RNF138Q8WVD3 245 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 TEX22C9J3V5 150 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 PCNX2A6NKB5 2137 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 TRBV7-3A0A075B6L6 115 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 CCL25O15444 150 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 KRTAP27-1Q3LI81 207 aa9.14□□□□□ -0.95
SHPRH-201ENST00000275233 TNRC6BQ9UPQ9 1833 aaKnown RBP9.13□□□□□ -0.95
SHPRH-201ENST00000275233 C19orf84I3L1E1 186 aa9.13□□□□□ -0.95
SHPRH-201ENST00000275233 MDFICQ9P1T7 246 aa9.13□□□□□ -0.95
SHPRH-201ENST00000275233 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-201ENST00000275233 ARHGAP21Q5T5U3 1957 aa9.13□□□□□ -0.95
SHPRH-201ENST00000275233 MED13LQ71F56 2210 aa9.13□□□□□ -0.95
SHPRH-201ENST00000275233 C5orf47Q569G3 176 aa9.13□□□□□ -0.95
SHPRH-201ENST00000275233 WI2-2373I1.2A0A1W2PRP0 233 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 MYCNOSP40205 109 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 C10orf91Q5T1B1 145 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 ZNF106Q9H2Y7 1883 aaKnown RBP9.12□□□□□ -0.95
SHPRH-201ENST00000275233 CDPF1Q6NVV7 123 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 DAZAP2Q15038 168 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-201ENST00000275233 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 Q8NA96 180 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 FUSP35637 526 aaKnown RBP eCLIP9.12□□□□□ -0.95
SHPRH-201ENST00000275233 Q8NFD4 153 aa9.12□□□□□ -0.95
SHPRH-201ENST00000275233 CACNA1HO95180 2353 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 NDUFA1O15239 70 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 ODF3L1Q8IXM7 274 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 TM2D2Q9BX73 214 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 HIGD2BQ4VC39 106 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 IGKV3D-7A0A0C4DH55 119 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 INAFM1C9JVW0 142 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 GTSF1Q8WW33 167 aa9.11□□□□□ -0.95
SHPRH-201ENST00000275233 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 P0DMU3 169 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 FAM231AP0DMU4 169 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 FAM231CP0DMU5 169 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 SIRPDQ9H106 197 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 LINC01548A6NM66 108 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 TMEM61Q8N0U2 210 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 BAALCQ8WXS3 180 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-201ENST00000275233 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-201ENST00000275233 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 FAM110AQ9BQ89 295 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
SHPRH-201ENST00000275233 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 NUPR1O60356 82 aa9.1□□□□□ -0.95
SHPRH-201ENST00000275233 TTTY13Q9BZ97 58 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 A4D1N5 150 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 SIVA1O15304 175 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 IL15RAQ13261 267 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 COL4A3Q01955 1670 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 IGHG2P01859 326 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
SHPRH-201ENST00000275233 GPHB5Q86YW7 130 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 OBSL1O75147 1896 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 TMEM131Q92545 1883 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 PLA2G5P39877 138 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 C11orf45Q8TAV5 145 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 FAM167A-AS1Q96KT0 104 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 A6NDX4 124 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
SHPRH-201ENST00000275233 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
SHPRH-201ENST00000275233 TRAV26-1A0A087WT03 109 aa9.07□□□□□ -0.96
SHPRH-201ENST00000275233 IGLV1-47P01700 117 aa9.07□□□□□ -0.96
SHPRH-201ENST00000275233 K7EMT4 169 aa9.07□□□□□ -0.96
SHPRH-201ENST00000275233 PRORYQ9H606 182 aa9.07□□□□□ -0.96
SHPRH-201ENST00000275233 CLEC2BQ92478 149 aa9.06□□□□□ -0.96
SHPRH-201ENST00000275233 C14orf132Q9NPU4 83 aa9.06□□□□□ -0.96
SHPRH-201ENST00000275233 NDUFB1O75438 58 aa9.06□□□□□ -0.96
SHPRH-201ENST00000275233 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
SHPRH-201ENST00000275233 WFDC9Q8NEX5 89 aa9.06□□□□□ -0.96
SHPRH-201ENST00000275233 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
SHPRH-201ENST00000275233 IGHV4-31P0DP07 118 aa9.05□□□□□ -0.96
SHPRH-201ENST00000275233 NREPQ16612 68 aa9.05□□□□□ -0.96
SHPRH-201ENST00000275233 TDRG1Q3Y452 100 aa9.05□□□□□ -0.96
SHPRH-201ENST00000275233 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
SHPRH-201ENST00000275233 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
SHPRH-201ENST00000275233 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms