RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 HIST1H4AP62805 103 aaKnown RBP12.49□□□□□ -0.41
CTCF-201ENST00000264010 IGHV7-4-1A0A0J9YVY3 117 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 PSMG4Q5JS54 123 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 ZNF462Q96JM2 2506 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 MAPK1IP1LQ8NDC0 245 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 RNF223E7ERA6 249 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 Q8N976 141 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 NRGNQ92686 78 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 PTPN13Q12923 2485 aa12.48□□□□□ -0.41
CTCF-201ENST00000264010 PPP1R17O96001 155 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 SPANXB1Q9NS25 103 aaPredicted RBP12.47□□□□□ -0.41
CTCF-201ENST00000264010 AGRNO00468 2067 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
CTCF-201ENST00000264010 ZNF625Q96I27 306 aaPredicted RBP12.47□□□□□ -0.41
CTCF-201ENST00000264010 IGHV4-59P01825 116 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 LGALS9CQ6DKI2 356 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
CTCF-201ENST00000264010 FOXE3Q13461 319 aa12.46□□□□□ -0.41
CTCF-201ENST00000264010 TCTEX1D4Q5JR98 221 aa12.46□□□□□ -0.41
CTCF-201ENST00000264010 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.414e-7■□□□□ 9.1
CTCF-201ENST00000264010 LINC01545Q5VT33 79 aa12.46□□□□□ -0.41
CTCF-201ENST00000264010 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.42
CTCF-201ENST00000264010 M0QXV9 152 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 DNAL4O96015 105 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 TRBV12-3P01733 135 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 FGF6P10767 208 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 LOXL1Q08397 574 aaPredicted RBP12.45□□□□□ -0.42
CTCF-201ENST00000264010 TMEM101Q96IK0 257 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 CCDC179H3BU77 68 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 DYNLRB2Q8TF09 96 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 PKD1L2Q7Z442 2459 aa12.45□□□□□ -0.42
CTCF-201ENST00000264010 AJUBAQ96IF1 538 aa12.44□□□□□ -0.42
CTCF-201ENST00000264010 PRB1P04280 392 aa12.44□□□□□ -0.42
CTCF-201ENST00000264010 LAGE3Q14657 143 aa12.44□□□□□ -0.42
CTCF-201ENST00000264010 CLPSL1A2RUU4 121 aa12.44□□□□□ -0.42
CTCF-201ENST00000264010 DPH3P1Q9H4G8 78 aa12.44□□□□□ -0.42
CTCF-201ENST00000264010 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
CTCF-201ENST00000264010 CD7P09564 240 aa12.43□□□□□ -0.42
CTCF-201ENST00000264010 Q8N8P6 123 aa12.43□□□□□ -0.42
CTCF-201ENST00000264010 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
CTCF-201ENST00000264010 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
CTCF-201ENST00000264010 XGP55808 180 aa12.43□□□□□ -0.42
CTCF-201ENST00000264010 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
CTCF-201ENST00000264010 FAM236AA0A1B0GUQ0 79 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 FAM236BA0A1B0GV22 79 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 COX8CQ7Z4L0 72 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 ANKRD29Q8N6D5 301 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 H3BMM0 161 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 URB1-AS1Q96HZ7 61 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 C14orf178Q8N769 122 aaPredicted RBP12.42□□□□□ -0.42
CTCF-201ENST00000264010 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
CTCF-201ENST00000264010 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
CTCF-201ENST00000264010 TEN1Q86WV5 123 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 SYNJ2BPP57105 145 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 NEGR1Q7Z3B1 354 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 KLHL30-AS1Q8NEE0 82 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 U3KQE9 123 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 F6UB75 175 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 DCHS2Q6V1P9 2916 aa12.41□□□□□ -0.42
CTCF-201ENST00000264010 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
CTCF-201ENST00000264010 PIFOQ8TCI5 191 aa12.4□□□□□ -0.42
CTCF-201ENST00000264010 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
CTCF-201ENST00000264010 K7EMT4 169 aa12.4□□□□□ -0.43
CTCF-201ENST00000264010 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.43
CTCF-201ENST00000264010 LRBAP50851 2863 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 MYMXA0A1B0GTQ4 84 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 ELANEP08246 267 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 U3KQK5 164 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 H7C1H1 209 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 SPRY2O43597 315 aa12.39□□□□□ -0.43
CTCF-201ENST00000264010 ATXN8Q156A1 80 aa12.38□□□□□ -0.43
CTCF-201ENST00000264010 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
CTCF-201ENST00000264010 PLNP26678 52 aa12.38□□□□□ -0.43
CTCF-201ENST00000264010 C2orf91Q6ZV80 131 aa12.38□□□□□ -0.43
CTCF-201ENST00000264010 M0R2P5 195 aa12.37□□□□□ -0.43
CTCF-201ENST00000264010 GPHB5Q86YW7 130 aa12.37□□□□□ -0.43
CTCF-201ENST00000264010 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
CTCF-201ENST00000264010 ADARB2-AS1A8MUL3 147 aa12.37□□□□□ -0.43
CTCF-201ENST00000264010 IGHG4P01861 327 aa12.37□□□□□ -0.43
CTCF-201ENST00000264010 TRAV13-1A0A0B4J241 112 aa12.36□□□□□ -0.43
CTCF-201ENST00000264010 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
CTCF-201ENST00000264010 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
CTCF-201ENST00000264010 MYO9AB2RTY4 2548 aa12.36□□□□□ -0.43
CTCF-201ENST00000264010 C20orf173Q96LM9 149 aa12.36□□□□□ -0.43
CTCF-201ENST00000264010 IGKV2D-26A0A0A0MRZ7 120 aa12.35□□□□□ -0.43
CTCF-201ENST00000264010 DEFB1P60022 68 aa12.35□□□□□ -0.43
CTCF-201ENST00000264010 PRO1854Q9UHT4 67 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms