RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ATOX1O00244 68 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 LINC01559Q495D7 138 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
LDB3-201ENST00000263066 FAM90A1Q86YD7 464 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 LGALS9O00182 355 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 Q8TAT8 98 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 FAM167A-AS1Q96KT0 104 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 MSRB1Q9NZV6 116 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 IGKV3D-7A0A0C4DH55 119 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 SH2D1AO60880 128 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 IGHG4P01861 327 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 ZNF22P17026 224 aaPredicted RBP6.53□□□□□ -1.36
LDB3-201ENST00000263066 C1orf159Q96HA4 380 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 NACAE9PAV3 2078 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 A0A096LNJ9 63 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 COX7CP15954 63 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 PRCDQ00LT1 54 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 Q6P435 159 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 Q96MF0 132 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 ITPR1Q14643 2758 aa6.53□□□□□ -1.36
LDB3-201ENST00000263066 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.36
LDB3-201ENST00000263066 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.52□□□□□ -1.36
LDB3-201ENST00000263066 TRBV10-2A0A0K0K1G8 114 aa6.52□□□□□ -1.36
LDB3-201ENST00000263066 M0R381 172 aa6.52□□□□□ -1.36
LDB3-201ENST00000263066 MYCNOSP40205 109 aa6.52□□□□□ -1.36
LDB3-201ENST00000263066 TMEM243Q9BU79 118 aa6.52□□□□□ -1.36
LDB3-201ENST00000263066 SLC25A39Q9BZJ4 359 aaPredicted RBP6.52□□□□□ -1.36
LDB3-201ENST00000263066 IGHV3OR16-8A0A075B7F1 116 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 IGKV3-15P01624 115 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 ECSCRQ19T08 205 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 ODF3Q96PU9 254 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 PRSS22Q9GZN4 317 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 RHOHQ15669 191 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 MSMPQ1L6U9 139 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
LDB3-201ENST00000263066 IGKV2-40A0A087WW87 121 aaPredicted RBP6.51□□□□□ -1.37
LDB3-201ENST00000263066 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 C19orf71A6NCJ1 209 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 F8WDY8 70 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 IGKV2D-40P01614 121 aaPredicted RBP6.51□□□□□ -1.37
LDB3-201ENST00000263066 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
LDB3-201ENST00000263066 VMA21Q3ZAQ7 101 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 RETNQ9HD89 108 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 WIPF1O43516 503 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 SAA1P0DJI8 122 aaPredicted RBP6.51□□□□□ -1.37
LDB3-201ENST00000263066 PIP4P2Q8N4L2 257 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 FOXA2Q9Y261 457 aaPredicted RBP6.51□□□□□ -1.37
LDB3-201ENST00000263066 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 UPK2O00526 184 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 Q8N8P6 123 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 TMEM75Q8N9X5 138 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 CLEC2BQ92478 149 aa6.51□□□□□ -1.37
LDB3-201ENST00000263066 WI2-2373I1.2A0A1W2PRP0 233 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 SAA2P0DJI9 122 aaPredicted RBP6.5□□□□□ -1.37
LDB3-201ENST00000263066 RNASE2P10153 161 aaKnown RBP6.5□□□□□ -1.37
LDB3-201ENST00000263066 FGF23Q9GZV9 251 aaPredicted RBP6.5□□□□□ -1.37
LDB3-201ENST00000263066 A0A1W2PRX2 142 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 PRSS46E5RG02 174 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 BRWD1-AS2P59051 145 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 TMEM258P61165 79 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 CFHR4Q92496 578 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 IQCF6A8MYZ5 107 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 SPRY2O43597 315 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 CRYGBP07316 175 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 MALP21145 153 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 RNF182Q8N6D2 247 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
LDB3-201ENST00000263066 NCKAP5O14513 1909 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 IGHV3OR16-13A0A075B7E8 117 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 IGHV3-74A0A0B4J1X5 117 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 ADARB2-AS1A8MUL3 147 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 IGFL4Q6B9Z1 124 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 ZNF625Q96I27 306 aaPredicted RBP6.49□□□□□ -1.37
LDB3-201ENST00000263066 UTP20O75691 2785 aaKnown RBP6.49□□□□□ -1.37
LDB3-201ENST00000263066 ITPR2Q14571 2701 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 P0C879 139 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 UBE2D3P61077 147 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 UBE2D2P62837 147 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 DTX2Q86UW9 622 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 SPANXDQ9BXN6 97 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 TMEM133Q9H2Q1 129 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 IGKV1-16P04430 117 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 NDPQ00604 133 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 RUSC1-AS1Q66K80 236 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 MLST8Q9BVC4 326 aa6.49□□□□□ -1.37
LDB3-201ENST00000263066 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 TMEM14BQ9NUH8 114 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms