RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 GNRH2O43555 120 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 LINC00477Q96M19 166 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 NPYP01303 97 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 CKS2P33552 79 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 NHP2Q9NX24 153 aaKnown RBP10.17□□□□□ -0.78
VMP1-201ENST00000262291 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
VMP1-201ENST00000262291 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 TMEM89A2RUT3 159 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 KLHL30-AS1Q8NEE0 82 aa10.17□□□□□ -0.78
VMP1-201ENST00000262291 A0A096LNJ9 63 aa10.16□□□□□ -0.78
VMP1-201ENST00000262291 A0A1B0GW15 77 aa10.16□□□□□ -0.78
VMP1-201ENST00000262291 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
VMP1-201ENST00000262291 M0R381 172 aa10.16□□□□□ -0.78
VMP1-201ENST00000262291 SRSF2Q01130 221 aaKnown RBP10.16□□□□□ -0.78
VMP1-201ENST00000262291 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
VMP1-201ENST00000262291 SIGLEC8Q9NYZ4 499 aa10.16□□□□□ -0.78
VMP1-201ENST00000262291 ANK3Q12955 4377 aaKnown RBP10.15□□□□□ -0.78
VMP1-201ENST00000262291 ID1P41134 155 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 SPANXN1Q5VSR9 72 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 Q8N2B8 174 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 OR9G4Q8NGQ1 327 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 TRAV12-3A0A0B4J271 114 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 DPF1Q92782 380 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
VMP1-201ENST00000262291 J3QR89 54 aa10.14□□□□□ -0.79
VMP1-201ENST00000262291 S100A4P26447 101 aaKnown RBP10.14□□□□□ -0.79
VMP1-201ENST00000262291 DKK2Q9UBU2 259 aa10.14□□□□□ -0.79
VMP1-201ENST00000262291 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
VMP1-201ENST00000262291 DLX4Q92988 240 aaPredicted RBP10.14□□□□□ -0.79
VMP1-201ENST00000262291 HIVEP2P31629 2446 aa10.14□□□□□ -0.79
VMP1-201ENST00000262291 IGKV2D-26A0A0A0MRZ7 120 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 TRAV21A0A0B4J279 112 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 K7EQG2 157 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 RNF152Q8N8N0 203 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 KNCNA6PVL3 124 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 LINC01619G3V211 115 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 CD28P10747 220 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 SPINK13Q1W4C9 94 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
VMP1-201ENST00000262291 FOXC2Q99958 501 aa10.12□□□□□ -0.79
VMP1-201ENST00000262291 CNFNQ9BYD5 112 aa10.12□□□□□ -0.79
VMP1-201ENST00000262291 U3KQK5 164 aa10.12□□□□□ -0.79
VMP1-201ENST00000262291 SNRPD3P62318 126 aaKnown RBP10.12□□□□□ -0.79
VMP1-201ENST00000262291 LGALS9O00182 355 aa10.11□□□□□ -0.79
VMP1-201ENST00000262291 LENEPQ9Y5L5 61 aa10.11□□□□□ -0.79
VMP1-201ENST00000262291 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
VMP1-201ENST00000262291 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
VMP1-201ENST00000262291 SETXQ7Z333 2677 aaKnown RBP10.1□□□□□ -0.79
VMP1-201ENST00000262291 MUC4Q99102 2169 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 A0A0J9YX75 114 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 ASIPP42127 132 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 TMEM61Q8N0U2 210 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 C14orf178Q8N769 122 aaPredicted RBP10.1□□□□□ -0.79
VMP1-201ENST00000262291 PHLDA1Q8WV24 401 aaPredicted RBP10.1□□□□□ -0.79
VMP1-201ENST00000262291 C4orf3Q8WVX3 66 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 RNF183Q96D59 192 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 F8W1H4 67 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 MT-ATP8P03928 68 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 PRM2P04554 102 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 DEFB131AP59861 70 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
VMP1-201ENST00000262291 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
VMP1-201ENST00000262291 NOTCH3Q9UM47 2321 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 SIVA1O15304 175 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 HTN1P15515 57 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 ZNF479Q96JC4 524 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
VMP1-201ENST00000262291 JPT2Q9H910 190 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 OTOGQ6ZRI0 2925 aa10.09□□□□□ -0.79
VMP1-201ENST00000262291 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
VMP1-201ENST00000262291 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 KLLNB2CW77 178 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 IGLL5B9A064 214 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 MGPP08493 103 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 CD7P09564 240 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 TMEM86BQ8N661 226 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 GAGE13Q4V321 117 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
VMP1-201ENST00000262291 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 FCER1GP30273 86 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 FAM159AQ6UWV7 190 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
VMP1-201ENST00000262291 E9PLD3 99 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms