RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MINOS1-NBL1R4GNA1 71 aa11.98□□□□□ -0.49
LMNB1-201ENST00000261366 TRAV2A0A0B4J234 112 aa11.98□□□□□ -0.49
LMNB1-201ENST00000261366 C9JAW5 83 aa11.98□□□□□ -0.49
LMNB1-201ENST00000261366 LY6DQ14210 128 aa11.98□□□□□ -0.49
LMNB1-201ENST00000261366 ZNRF2Q8NHG8 242 aa11.98□□□□□ -0.49
LMNB1-201ENST00000261366 LINC01619G3V211 115 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 C9orf139Q6ZV77 190 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 EDN2P20800 178 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 Q1RN00 199 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 ADARB2-AS1A8MUL3 147 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 FBXL19-AS1Q494R0 122 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
LMNB1-201ENST00000261366 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
LMNB1-201ENST00000261366 IGHV3-30P01768 117 aa11.96□□□□□ -0.49
LMNB1-201ENST00000261366 IGHV3-30-5P0DP03 117 aa11.96□□□□□ -0.49
LMNB1-201ENST00000261366 PMVKQ15126 192 aa11.96□□□□□ -0.49
LMNB1-201ENST00000261366 LINC00477Q96M19 166 aa11.96□□□□□ -0.49
LMNB1-201ENST00000261366 A4D1N5 150 aa11.96□□□□□ -0.5
LMNB1-201ENST00000261366 LY6EQ16553 131 aa11.96□□□□□ -0.5
LMNB1-201ENST00000261366 SUMO4Q6EEV6 95 aa11.96□□□□□ -0.5
LMNB1-201ENST00000261366 BRD3OSQ6XYD6 125 aa11.96□□□□□ -0.5
LMNB1-201ENST00000261366 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.5
LMNB1-201ENST00000261366 MRPL53Q96EL3 112 aaKnown RBP11.96□□□□□ -0.5
LMNB1-201ENST00000261366 ZNF580Q9UK33 172 aa11.96□□□□□ -0.5
LMNB1-201ENST00000261366 SDHAF1A6NFY7 115 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 LGALS3P17931 250 aaKnown RBP11.95□□□□□ -0.5
LMNB1-201ENST00000261366 C10orf126Q8N4M7 172 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 AJUBAQ96IF1 538 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 ANAPC13Q9BS18 74 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 TRAV12-3A0A0B4J271 114 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 SS18L2Q9UHA2 77 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 PRO1854Q9UHT4 67 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 U3KQE9 123 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
LMNB1-201ENST00000261366 J3QQQ9 107 aa11.94□□□□□ -0.5
LMNB1-201ENST00000261366 ZNF688P0C7X2 276 aa11.94□□□□□ -0.5
LMNB1-201ENST00000261366 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
LMNB1-201ENST00000261366 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
LMNB1-201ENST00000261366 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 SLC25A20O43772 301 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 LYRM7Q5U5X0 104 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 ELANEP08246 267 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 TRAV12-2A0A075B6T6 113 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 UBE2E1P51965 193 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 FAM159AQ6UWV7 190 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 C5orf56Q8N8D9 126 aa11.93□□□□□ -0.5
LMNB1-201ENST00000261366 NPC2P61916 151 aa11.92□□□□□ -0.5
LMNB1-201ENST00000261366 ZNF56Q15929 161 aa11.92□□□□□ -0.5
LMNB1-201ENST00000261366 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
LMNB1-201ENST00000261366 HIVEP3Q5T1R4 2406 aa11.92□□□□□ -0.5
LMNB1-201ENST00000261366 TRBV20-1A0A075B6N2 111 aa11.92□□□□□ -0.5
LMNB1-201ENST00000261366 OVOL1O14753 267 aa11.91□□□□□ -0.5
LMNB1-201ENST00000261366 EIF4EBP3O60516 100 aaPredicted RBP11.91□□□□□ -0.5
LMNB1-201ENST00000261366 LINC00315P59091 139 aa11.91□□□□□ -0.5
LMNB1-201ENST00000261366 BPESC1Q9GZL8 116 aa11.91□□□□□ -0.5
LMNB1-201ENST00000261366 PF4V1P10720 104 aa11.91□□□□□ -0.5
LMNB1-201ENST00000261366 NPFFO15130 113 aa11.9□□□□□ -0.5
LMNB1-201ENST00000261366 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
LMNB1-201ENST00000261366 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
LMNB1-201ENST00000261366 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
LMNB1-201ENST00000261366 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
LMNB1-201ENST00000261366 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
LMNB1-201ENST00000261366 TEX29Q8N6K0 151 aa11.9□□□□□ -0.5
LMNB1-201ENST00000261366 B5MCH6 92 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 VCYO14598 125 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 PRSS2P07478 247 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 HTN1P15515 57 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 POLR2KP53803 58 aaKnown RBP11.89□□□□□ -0.51
LMNB1-201ENST00000261366 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 KIF25-AS1Q9Y6Z4 181 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 SOCS3O14543 225 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 CRLF1O75462 422 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 MDFICQ9P1T7 246 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 KLK9Q9UKQ9 250 aa11.89□□□□□ -0.51
LMNB1-201ENST00000261366 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
LMNB1-201ENST00000261366 A0A0J9YXV3 536 aa11.88□□□□□ -0.51
LMNB1-201ENST00000261366 AMELXQ99217 191 aa11.88□□□□□ -0.51
LMNB1-201ENST00000261366 IGHV3-73A0A0B4J1V6 119 aa11.88□□□□□ -0.51
LMNB1-201ENST00000261366 PAPPA-AS1Q5QFB9 102 aa11.88□□□□□ -0.51
LMNB1-201ENST00000261366 CELSR2Q9HCU4 2923 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 TRAV4A0A0B4J268 109 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 TEX49A0A1B0GTD5 131 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 PPP1R17O96001 155 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 ZNF876PQ49A33 203 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 SPXQ9BT56 116 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 PIEZO1Q92508 2521 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
LMNB1-201ENST00000261366 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
LMNB1-201ENST00000261366 Q6ZSV7 163 aa11.86□□□□□ -0.51
LMNB1-201ENST00000261366 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
LMNB1-201ENST00000261366 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
LMNB1-201ENST00000261366 BLCAPP62952 87 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms