RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
RABEPK-201ENST00000259460 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
RABEPK-201ENST00000259460 MUC2Q02817 5179 aa9.72□□□□□ -0.85
RABEPK-201ENST00000259460 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
RABEPK-201ENST00000259460 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
RABEPK-201ENST00000259460 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
RABEPK-201ENST00000259460 FAM210AQ96ND0 272 aa9.72□□□□□ -0.85
RABEPK-201ENST00000259460 IGKV3D-20A0A0C4DH25 116 aa9.71□□□□□ -0.86
RABEPK-201ENST00000259460 H3BVH4 76 aa9.71□□□□□ -0.86
RABEPK-201ENST00000259460 M0R2P5 195 aa9.71□□□□□ -0.86
RABEPK-201ENST00000259460 CRIP1P50238 77 aa9.71□□□□□ -0.86
RABEPK-201ENST00000259460 PARLQ9H300 379 aa9.71□□□□□ -0.86
RABEPK-201ENST00000259460 MSRB1Q9NZV6 116 aa9.71□□□□□ -0.86
RABEPK-201ENST00000259460 GRIFINA4D1Z8 144 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 C9JCJ5 164 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 TMEM250H0YL14 139 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 HOXA5P20719 270 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 HNRNPA3P51991 378 aaKnown RBP9.7□□□□□ -0.86
RABEPK-201ENST00000259460 Q8N814 137 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 DAZAP1Q96EP5 407 aaKnown RBP9.7□□□□□ -0.86
RABEPK-201ENST00000259460 MLST8Q9BVC4 326 aa9.7□□□□□ -0.86
RABEPK-201ENST00000259460 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
RABEPK-201ENST00000259460 RAB14P61106 215 aa9.69□□□□□ -0.86
RABEPK-201ENST00000259460 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
RABEPK-201ENST00000259460 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
RABEPK-201ENST00000259460 SMIM12Q96EX1 92 aa9.69□□□□□ -0.86
RABEPK-201ENST00000259460 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
RABEPK-201ENST00000259460 A0A096LPF7 62 aa9.68□□□□□ -0.86
RABEPK-201ENST00000259460 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
RABEPK-201ENST00000259460 RNASE3P12724 160 aaKnown RBP9.68□□□□□ -0.86
RABEPK-201ENST00000259460 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
RABEPK-201ENST00000259460 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 H3BNG1 76 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 PSCAO43653 123 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 IGLV2-8P01709 118 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 SFTA3P0C7M3 94 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 ZNF876PQ49A33 203 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 SMIM7Q9BQ49 75 aa9.67□□□□□ -0.86
RABEPK-201ENST00000259460 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
RABEPK-201ENST00000259460 SRP19P09132 144 aaKnown RBP9.66□□□□□ -0.86
RABEPK-201ENST00000259460 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
RABEPK-201ENST00000259460 RASL10AQ92737 203 aa9.66□□□□□ -0.86
RABEPK-201ENST00000259460 IL36BQ9NZH7 164 aa9.66□□□□□ -0.86
RABEPK-201ENST00000259460 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
RABEPK-201ENST00000259460 NDUFS6O75380 124 aaKnown RBP9.65□□□□□ -0.86
RABEPK-201ENST00000259460 P01737 135 aa9.65□□□□□ -0.86
RABEPK-201ENST00000259460 PEA15Q15121 130 aa9.65□□□□□ -0.86
RABEPK-201ENST00000259460 OR2D3Q8NGH3 330 aa9.65□□□□□ -0.86
RABEPK-201ENST00000259460 ZNF479Q96JC4 524 aa9.65□□□□□ -0.86
RABEPK-201ENST00000259460 LY96Q9Y6Y9 160 aa9.65□□□□□ -0.86
RABEPK-201ENST00000259460 ZNF727A8MUV8 499 aa9.64□□□□□ -0.87
RABEPK-201ENST00000259460 CXCL1P09341 107 aa9.64□□□□□ -0.87
RABEPK-201ENST00000259460 DNLZQ5SXM8 178 aa9.64□□□□□ -0.87
RABEPK-201ENST00000259460 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 M0R381 172 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 PAX4O43316 350 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 RPS20P60866 119 aaKnown RBP9.63□□□□□ -0.87
RABEPK-201ENST00000259460 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
RABEPK-201ENST00000259460 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 PRO0255Q9UI72 69 aa9.63□□□□□ -0.87
RABEPK-201ENST00000259460 IGHV3-73A0A0B4J1V6 119 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 K7EN84 100 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 GZMBP10144 247 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 SLAQ13239 276 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 FHL2Q14192 279 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 LPAP08519 4548 aa9.62□□□□□ -0.87
RABEPK-201ENST00000259460 A8MWV9 139 aa9.61□□□□□ -0.87
RABEPK-201ENST00000259460 SRSF3P84103 164 aaKnown RBP9.61□□□□□ -0.87
RABEPK-201ENST00000259460 CFAP126Q5VTH2 177 aa9.61□□□□□ -0.87
RABEPK-201ENST00000259460 PTH2Q96A98 100 aa9.61□□□□□ -0.87
RABEPK-201ENST00000259460 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
RABEPK-201ENST00000259460 RNASE7Q9H1E1 156 aaKnown RBP9.61□□□□□ -0.87
RABEPK-201ENST00000259460 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
RABEPK-201ENST00000259460 ICOSQ9Y6W8 199 aa9.61□□□□□ -0.87
RABEPK-201ENST00000259460 GATCO43716 136 aaKnown RBP9.6□□□□□ -0.87
RABEPK-201ENST00000259460 CRYBA4P53673 196 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 SSTP61278 116 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 IFITM2Q01629 132 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 CLLU1Q5K131 121 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 SPANXN1Q5VSR9 72 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 NUDT10Q8NFP7 164 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 NUDT11Q96G61 164 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
RABEPK-201ENST00000259460 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
RABEPK-201ENST00000259460 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
RABEPK-201ENST00000259460 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
RABEPK-201ENST00000259460 SNAI2O43623 268 aa9.59□□□□□ -0.87
RABEPK-201ENST00000259460 ODF1Q14990 250 aa9.59□□□□□ -0.87
RABEPK-201ENST00000259460 FAM74A3Q4VXF1 159 aa9.59□□□□□ -0.87
RABEPK-201ENST00000259460 PIK3CD-AS1Q5SR53 167 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms