RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 METTL26Q96S19 204 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 ABCA12Q86UK0 2595 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 IGHV3OR16-10A0A075B7F0 116 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 TSHBP01222 138 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 IGHV3-30P01768 117 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 IGHV3-30-5P0DP03 117 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 HERVK_113P61574 105 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 C9orf47Q6ZRZ4 202 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 IGKV3-7A0A075B6H7 116 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 SLC25A20O43772 301 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 PRO1854Q9UHT4 67 aa11.16□□□□□ -0.62
MSI1-201ENST00000257552 ATP6V0E1O15342 81 aa11.15□□□□□ -0.62
MSI1-201ENST00000257552 GAGE5Q13069 117 aa11.15□□□□□ -0.62
MSI1-201ENST00000257552 GAGE6Q13070 117 aa11.15□□□□□ -0.62
MSI1-201ENST00000257552 ASIPP42127 132 aa11.15□□□□□ -0.62
MSI1-201ENST00000257552 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
MSI1-201ENST00000257552 IGHV3-64A0A075B6Q5 118 aa11.14□□□□□ -0.63
MSI1-201ENST00000257552 ODF3BA8MYP8 253 aa11.14□□□□□ -0.63
MSI1-201ENST00000257552 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
MSI1-201ENST00000257552 Q8N9W7 124 aa11.14□□□□□ -0.63
MSI1-201ENST00000257552 BEX4Q9NWD9 120 aaPredicted RBP11.14□□□□□ -0.63
MSI1-201ENST00000257552 PTPN13Q12923 2485 aa11.14□□□□□ -0.63
MSI1-201ENST00000257552 CRLF1O75462 422 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 JPT2Q9H910 190 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 TRAV4A0A0B4J268 109 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 A4D1N5 150 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 F6UB75 175 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 NHLRC4P0CG21 123 aaPredicted RBP11.13□□□□□ -0.63
MSI1-201ENST00000257552 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 Q8N6K4 173 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 VCX2Q9H322 139 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
MSI1-201ENST00000257552 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 Q1RN00 199 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
MSI1-201ENST00000257552 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 IGHV4-39P01824 125 aa11.12□□□□□ -0.63
MSI1-201ENST00000257552 RPL11P62913 178 aaKnown RBP11.12□□□□□ -0.63
MSI1-201ENST00000257552 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
MSI1-201ENST00000257552 A0A087WWL8 130 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 F5H697 171 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 SNCGO76070 127 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
MSI1-201ENST00000257552 PMVKQ15126 192 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 C1orf122Q6ZSJ8 110 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
MSI1-201ENST00000257552 ELANEP08246 267 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 CITED1Q99966 193 aa11.11□□□□□ -0.63
MSI1-201ENST00000257552 J3QQQ9 107 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 CUBNO60494 3623 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 IGIPA6NJ69 53 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 M0R1W7 72 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
MSI1-201ENST00000257552 PRB1P04280 392 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 ABCA2Q9BZC7 2435 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 CCDC179H3BU77 68 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
MSI1-201ENST00000257552 NRGNQ92686 78 aa11.09□□□□□ -0.63
MSI1-201ENST00000257552 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
MSI1-201ENST00000257552 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
MSI1-201ENST00000257552 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
MSI1-201ENST00000257552 ZNF256Q9Y2P7 627 aaPredicted RBP11.09□□□□□ -0.63
MSI1-201ENST00000257552 FBN2P35556 2912 aa11.09□□□□□ -0.63
MSI1-201ENST00000257552 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 RNASE3P12724 160 aaKnown RBP11.08□□□□□ -0.64
MSI1-201ENST00000257552 NDUFV3P56181 108 aaKnown RBP11.08□□□□□ -0.64
MSI1-201ENST00000257552 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 Q8N1Y9 231 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 CENPVL3A0A0U1RRI6 287 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 IGHV3-33P01772 117 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 SAA4P35542 130 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 TLN2Q9Y4G6 2542 aa11.08□□□□□ -0.64
MSI1-201ENST00000257552 RHODO00212 210 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 FAM74A4Q5TZK3 123 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 MUSTN1Q8IVN3 82 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 AMELXQ99217 191 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 SRD5A1P18405 259 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 UNQ9165/PRO28630Q6UXU0 137 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
MSI1-201ENST00000257552 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 LMO4P61968 165 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 EBI3Q14213 229 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 C9orf139Q6ZV77 190 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms