RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 A0A096LNJ9 63 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 H3BUT2 72 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 SMIM13P0DJ93 91 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 HIST2H2BDQ6DRA6 164 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
RFX1-201ENST00000254325 FLNCQ14315 2725 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 ODF1Q14990 250 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 COL12A1Q99715 3063 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 CFHR3Q02985 330 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 AMMECR1LQ6DCA0 310 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 SUMO4Q6EEV6 95 aa11.79□□□□□ -0.52
RFX1-201ENST00000254325 SMG1Q96Q15 3661 aaKnown RBP11.78□□□□□ -0.52
RFX1-201ENST00000254325 A0A087WX48 190 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 NRACQ8N912 160 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 RASL10AQ92737 203 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 ZNF415Q09FC8 603 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 Q1RN00 199 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 C18orf65Q6ZTR6 163 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 F8VRH5 84 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 LGALS9O00182 355 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 TMEM61Q8N0U2 210 aa11.78□□□□□ -0.52
RFX1-201ENST00000254325 RNASE3P12724 160 aaKnown RBP11.77□□□□□ -0.52
RFX1-201ENST00000254325 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.52
RFX1-201ENST00000254325 TTTY13Q9BZ97 58 aa11.77□□□□□ -0.52
RFX1-201ENST00000254325 XCL2Q9UBD3 114 aa11.77□□□□□ -0.52
RFX1-201ENST00000254325 IGHV4-4A0A075B6R2 117 aa11.77□□□□□ -0.53
RFX1-201ENST00000254325 SAP30O75446 220 aa11.77□□□□□ -0.53
RFX1-201ENST00000254325 APRG1Q8IVJ8 170 aa11.77□□□□□ -0.53
RFX1-201ENST00000254325 NHP2Q9NX24 153 aaKnown RBP11.77□□□□□ -0.53
RFX1-201ENST00000254325 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
RFX1-201ENST00000254325 TRPT1Q86TN4 253 aaKnown RBP11.77□□□□□ -0.53
RFX1-201ENST00000254325 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.53
RFX1-201ENST00000254325 SPENQ96T58 3664 aaKnown RBP11.77□□□□□ -0.53
RFX1-201ENST00000254325 INSP01308 110 aa11.76□□□□□ -0.53
RFX1-201ENST00000254325 UBE2V1Q13404 147 aa11.76□□□□□ -0.53
RFX1-201ENST00000254325 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
RFX1-201ENST00000254325 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
RFX1-201ENST00000254325 KLLNB2CW77 178 aa11.76□□□□□ -0.53
RFX1-201ENST00000254325 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
RFX1-201ENST00000254325 DLX4Q92988 240 aaPredicted RBP11.76□□□□□ -0.53
RFX1-201ENST00000254325 ZNF580Q9UK33 172 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 USP24Q9UPU5 2620 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 ZNF815PA8K554 130 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 LGALS3P17931 250 aaKnown RBP11.75□□□□□ -0.53
RFX1-201ENST00000254325 GAGE1Q13065 139 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 VCX2Q9H322 139 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 HLA-DRB4X5D2U9 266 aa11.75□□□□□ -0.53
RFX1-201ENST00000254325 K7EMI3 77 aa11.74□□□□□ -0.53
RFX1-201ENST00000254325 DNAJC9-AS1A6NH13 148 aa11.74□□□□□ -0.53
RFX1-201ENST00000254325 BOD1L2Q8IYS8 172 aa11.74□□□□□ -0.53
RFX1-201ENST00000254325 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
RFX1-201ENST00000254325 PRSS29PA6NIE9 313 aa11.74□□□□□ -0.53
RFX1-201ENST00000254325 MTORP42345 2549 aa11.74□□□□□ -0.53
RFX1-201ENST00000254325 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
RFX1-201ENST00000254325 PF4P02776 101 aa11.73□□□□□ -0.53
RFX1-201ENST00000254325 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
RFX1-201ENST00000254325 CCL24O00175 119 aa11.73□□□□□ -0.53
RFX1-201ENST00000254325 ODF3Q96PU9 254 aa11.73□□□□□ -0.53
RFX1-201ENST00000254325 CFAP46Q8IYW2 2715 aa11.73□□□□□ -0.53
RFX1-201ENST00000254325 LOC107984156A0A0G2JMH3 177 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 ARL17AQ8IVW1 177 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 ACANP16112 2415 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 SIVA1O15304 175 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 TOMM6Q96B49 74 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 PMVKQ15126 192 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 Q6ZSV7 163 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 SPCS1Q9Y6A9 102 aa11.72□□□□□ -0.53
RFX1-201ENST00000254325 CD28P10747 220 aa11.71□□□□□ -0.53
RFX1-201ENST00000254325 RRN3P1Q2M238 152 aa11.71□□□□□ -0.53
RFX1-201ENST00000254325 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.53
RFX1-201ENST00000254325 AGRNO00468 2067 aa11.71□□□□□ -0.54
RFX1-201ENST00000254325 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.54
RFX1-201ENST00000254325 A6NJY4 79 aa11.71□□□□□ -0.54
RFX1-201ENST00000254325 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.54
RFX1-201ENST00000254325 I3L3M4 83 aa11.7□□□□□ -0.54
RFX1-201ENST00000254325 TMEM86BQ8N661 226 aa11.7□□□□□ -0.54
RFX1-201ENST00000254325 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
RFX1-201ENST00000254325 ITPR1Q14643 2758 aa11.7□□□□□ -0.54
RFX1-201ENST00000254325 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
RFX1-201ENST00000254325 A8MWV9 139 aa11.7□□□□□ -0.54
RFX1-201ENST00000254325 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
RFX1-201ENST00000254325 TRBV25-1A0A075B6N4 114 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 A0A1B0GV72 72 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
RFX1-201ENST00000254325 PSMB2P49721 201 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 TAX1BP3O14907 124 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 PHLDA1Q8WV24 401 aaPredicted RBP11.69□□□□□ -0.54
RFX1-201ENST00000254325 BAALCQ8WXS3 180 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 MRPL16Q9NX20 251 aaKnown RBP11.69□□□□□ -0.54
RFX1-201ENST00000254325 M0R2P5 195 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
RFX1-201ENST00000254325 IGKV2D-26A0A0A0MRZ7 120 aa11.68□□□□□ -0.54
RFX1-201ENST00000254325 H3BMM0 161 aa11.68□□□□□ -0.54
RFX1-201ENST00000254325 MAP6D1Q9H9H5 199 aa11.68□□□□□ -0.54
RFX1-201ENST00000254325 DCHS2Q6V1P9 2916 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms