RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 EVI2AP22794 236 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 GAGE1Q13065 139 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 GAGE4Q13068 117 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 GAGE5Q13069 117 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 GAGE13Q4V321 117 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 ALKAL2Q6UX46 152 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 OR10AG1Q8NH19 301 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 GTSF1LQ9H1H1 148 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 NKX2-5P52952 324 aaPredicted RBP15.54■□□□□ 0.08
LSM4-201ENST00000252816 SSBP4Q9BWG4 385 aaPredicted RBP15.54■□□□□ 0.08
LSM4-201ENST00000252816 VAX2Q9UIW0 290 aa15.54■□□□□ 0.08
LSM4-201ENST00000252816 TRBV20OR9-2A0A075B6H5 130 aa15.53■□□□□ 0.08
LSM4-201ENST00000252816 IGHV3-38A0A0C4DH36 116 aa15.53■□□□□ 0.08
LSM4-201ENST00000252816 SNAI2O43623 268 aa15.53■□□□□ 0.08
LSM4-201ENST00000252816 MED9Q9NWA0 146 aa15.53■□□□□ 0.08
LSM4-201ENST00000252816 MUC21A0A0G2JKD1 596 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 MUC21A0A140T8X8 626 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 K7EP13 123 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 GNG4P50150 75 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 OR10J3Q5JRS4 329 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 LELP1Q5T871 98 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 BOLA1Q9Y3E2 137 aa15.52■□□□□ 0.08
LSM4-201ENST00000252816 TRAV8-6A0A0B4J262 113 aa15.51■□□□□ 0.07
LSM4-201ENST00000252816 OR5AL1P0C617 328 aa15.51■□□□□ 0.07
LSM4-201ENST00000252816 LINC01556Q5JQF7 62 aa15.51■□□□□ 0.07
LSM4-201ENST00000252816 MSRB1Q9NZV6 116 aa15.51■□□□□ 0.07
LSM4-201ENST00000252816 LRP1BQ9NZR2 4599 aa15.5■□□□□ 0.07
LSM4-201ENST00000252816 C16orf90A8MZG2 172 aa15.5■□□□□ 0.07
LSM4-201ENST00000252816 TAGLN2P37802 199 aaKnown RBP15.5■□□□□ 0.07
LSM4-201ENST00000252816 SPATA12Q7Z6I5 190 aa15.5■□□□□ 0.07
LSM4-201ENST00000252816 SMIM12Q96EX1 92 aa15.5■□□□□ 0.07
LSM4-201ENST00000252816 C19orf71A6NCJ1 209 aa15.49■□□□□ 0.07
LSM4-201ENST00000252816 GZMBP10144 247 aa15.49■□□□□ 0.07
LSM4-201ENST00000252816 KRTAP10-2P60368 255 aa15.49■□□□□ 0.07
LSM4-201ENST00000252816 NFE4Q86UQ8 179 aa15.49■□□□□ 0.07
LSM4-201ENST00000252816 BLOC1S1P78537 153 aa15.48■□□□□ 0.07
LSM4-201ENST00000252816 C10orf126Q8N4M7 172 aa15.48■□□□□ 0.07
LSM4-201ENST00000252816 SSTP61278 116 aa15.47■□□□□ 0.07
LSM4-201ENST00000252816 SPANXN1Q5VSR9 72 aa15.47■□□□□ 0.07
LSM4-201ENST00000252816 OR2D3Q8NGH3 330 aa15.47■□□□□ 0.07
LSM4-201ENST00000252816 LYPD6BQ8NI32 183 aa15.47■□□□□ 0.07
LSM4-201ENST00000252816 DAZAP1Q96EP5 407 aaKnown RBP15.47■□□□□ 0.07
LSM4-201ENST00000252816 IGHV3-30P01768 117 aa15.46■□□□□ 0.07
LSM4-201ENST00000252816 IGHV3-33P01772 117 aa15.46■□□□□ 0.07
LSM4-201ENST00000252816 IGHV3-30-3P0DP02 117 aa15.46■□□□□ 0.07
LSM4-201ENST00000252816 IGHV3-30-5P0DP03 117 aa15.46■□□□□ 0.07
LSM4-201ENST00000252816 Q8N3U1 123 aa15.46■□□□□ 0.07
LSM4-201ENST00000252816 RBFOX3A6NFN3 312 aa15.45■□□□□ 0.06
LSM4-201ENST00000252816 IGLC6P0CF74 106 aa15.45■□□□□ 0.06
LSM4-201ENST00000252816 TRBV10-1A0A0K0K1A3 114 aa15.44■□□□□ 0.06
LSM4-201ENST00000252816 IBA57-AS1B1ANH7 110 aa15.44■□□□□ 0.06
LSM4-201ENST00000252816 RPS20P60866 119 aaKnown RBP15.44■□□□□ 0.06
LSM4-201ENST00000252816 RAB4BP61018 213 aa15.44■□□□□ 0.06
LSM4-201ENST00000252816 DNAH5Q8TE73 4624 aa15.44■□□□□ 0.06
LSM4-201ENST00000252816 P01737 135 aa15.43■□□□□ 0.06
LSM4-201ENST00000252816 FER1L6-AS1Q8NA97 138 aa15.43■□□□□ 0.06
LSM4-201ENST00000252816 TPPP3Q9BW30 176 aa15.43■□□□□ 0.06
LSM4-201ENST00000252816 ZNF56Q15929 161 aa15.42■□□□□ 0.06
LSM4-201ENST00000252816 BIN3Q9NQY0 253 aa15.42■□□□□ 0.06
LSM4-201ENST00000252816 KIF25-AS1Q9Y6Z4 181 aa15.42■□□□□ 0.06
LSM4-201ENST00000252816 TRBV7-3A0A075B6L6 115 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 A0A087WTM6 91 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 A0A087WWC5 75 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 K7EN84 100 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 ERVFC1-1P60608 527 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 UBE2D3P61077 147 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 UBE2D2P62837 147 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 RPL36AP83881 106 aaKnown RBP15.41■□□□□ 0.06
LSM4-201ENST00000252816 OR10G8Q8NGN5 311 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 OCC1Q8TAD7 63 aa15.41■□□□□ 0.06
LSM4-201ENST00000252816 RPL36ALQ969Q0 106 aaKnown RBP15.41■□□□□ 0.06
LSM4-201ENST00000252816 HSPG2P98160 4391 aa15.4■□□□□ 0.06
LSM4-201ENST00000252816 NEXN-AS1Q8NBZ9 246 aa15.4■□□□□ 0.06
LSM4-201ENST00000252816 NUDT10Q8NFP7 164 aa15.4■□□□□ 0.06
LSM4-201ENST00000252816 NUDT11Q96G61 164 aa15.4■□□□□ 0.06
LSM4-201ENST00000252816 AP1S3Q96PC3 154 aa15.4■□□□□ 0.06
LSM4-201ENST00000252816 TMEM250H0YL14 139 aa15.39■□□□□ 0.05
LSM4-201ENST00000252816 FUSP35637 526 aaKnown RBP eCLIP15.39■□□□□ 0.05
LSM4-201ENST00000252816 Q9HAA7 133 aa15.39■□□□□ 0.05
LSM4-201ENST00000252816 RYR1P21817 5038 aa15.38■□□□□ 0.05
LSM4-201ENST00000252816 XKRY2A2RUG3 117 aa15.38■□□□□ 0.05
LSM4-201ENST00000252816 F5H697 171 aa15.38■□□□□ 0.05
LSM4-201ENST00000252816 RNASE7Q9H1E1 156 aaKnown RBP15.38■□□□□ 0.05
LSM4-201ENST00000252816 EREGO14944 169 aa15.37■□□□□ 0.05
LSM4-201ENST00000252816 SMIM17P0DL12 118 aa15.37■□□□□ 0.05
LSM4-201ENST00000252816 CACNG7P62955 275 aa15.37■□□□□ 0.05
LSM4-201ENST00000252816 TOR2AQ5JU69 321 aa15.37■□□□□ 0.05
LSM4-201ENST00000252816 LYZL1Q6UWQ5 148 aa15.37■□□□□ 0.05
LSM4-201ENST00000252816 DAZ4Q86SG3 579 aaKnown RBP15.37■□□□□ 0.05
LSM4-201ENST00000252816 DAZ3Q9NR90 486 aaKnown RBP15.37■□□□□ 0.05
LSM4-201ENST00000252816 F2Z2F3 143 aa15.36■□□□□ 0.05
LSM4-201ENST00000252816 APOBP04114 4563 aaKnown RBP15.36■□□□□ 0.05
LSM4-201ENST00000252816 LAGE3Q14657 143 aa15.35■□□□□ 0.05
LSM4-201ENST00000252816 NIT1Q86X76 327 aa15.35■□□□□ 0.05
LSM4-201ENST00000252816 RPP21Q9H633 154 aaKnown RBP15.35■□□□□ 0.05
LSM4-201ENST00000252816 CTRLP40313 264 aa15.34■□□□□ 0.05
LSM4-201ENST00000252816 CEBPGP53567 150 aa15.34■□□□□ 0.05
LSM4-201ENST00000252816 PGPEP1Q9NXJ5 209 aa15.34■□□□□ 0.05
LSM4-201ENST00000252816 LRCOL1A6NCL2 159 aa15.33■□□□□ 0.04
LSM4-201ENST00000252816 CDK2AP2O75956 126 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms