RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 FGF6P10767 208 aa7.16□□□□□ -1.26
COL21A1-201ENST00000244728 ZNF625Q96I27 306 aaPredicted RBP7.16□□□□□ -1.26
COL21A1-201ENST00000244728 WDFY3Q8IZQ1 3526 aa7.16□□□□□ -1.26
COL21A1-201ENST00000244728 DPH3Q96FX2 82 aa7.16□□□□□ -1.26
COL21A1-201ENST00000244728 IGLV11-55A0A075B6I3 123 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 IGHV3-38A0A0C4DH36 116 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 WI2-2373I1.2A0A1W2PRP0 233 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 SCGB1A1P11684 91 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 AJUBAQ96IF1 538 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 SPXQ9BT56 116 aa7.15□□□□□ -1.26
COL21A1-201ENST00000244728 CDSNQ15517 529 aa7.15□□□□□ -1.27
COL21A1-201ENST00000244728 ANKRD17O75179 2603 aaKnown RBP7.15□□□□□ -1.27
COL21A1-201ENST00000244728 RPL39LQ96EH5 51 aaKnown RBP7.15□□□□□ -1.27
COL21A1-201ENST00000244728 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.14□□□□□ -1.27
COL21A1-201ENST00000244728 PMVKQ15126 192 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 C10orf126Q8N4M7 172 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 C10orf105Q8TEF2 133 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 SPAG8Q99932 426 aaPredicted RBP7.14□□□□□ -1.27
COL21A1-201ENST00000244728 IGHV7-4-1A0A0J9YVY3 117 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 RPL36AP83881 106 aaKnown RBP7.14□□□□□ -1.27
COL21A1-201ENST00000244728 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
COL21A1-201ENST00000244728 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 HOXD3P31249 432 aaPredicted RBP7.14□□□□□ -1.27
COL21A1-201ENST00000244728 C2orf82Q6UX34 121 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 TRANK1O15050 2925 aa7.14□□□□□ -1.27
COL21A1-201ENST00000244728 LINC01619G3V211 115 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 SDHAF1A6NFY7 115 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 INSP01308 110 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 ATXN8Q156A1 80 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 DEFB121Q5J5C9 76 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 FANCD2OSQ96PS1 177 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 C1QTNF4Q9BXJ3 329 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 TRBV12-3P01733 135 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 SLURP1P55000 103 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 HIST2H2BCQ6DN03 193 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 PLEKHB2Q96CS7 222 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 C20orf78Q9BR46 151 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE12JA6NER3 117 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 M0R2P5 195 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 BUB3O43684 328 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE4Q13068 117 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE5Q13069 117 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 FBXL19-AS1Q494R0 122 aa7.13□□□□□ -1.27
COL21A1-201ENST00000244728 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 SLC25A20O43772 301 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 DNAL4O96015 105 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 LMO4P61968 165 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
COL21A1-201ENST00000244728 APRG1Q8IVJ8 170 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 PTH2Q96A98 100 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 IGHV1OR15-1A0A075B7D0 117 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 IGLC6P0CF74 106 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 NPBQ8NG41 125 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 VPREB3Q9UKI3 123 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 ATRQ13535 2644 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 E9PLD3 99 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 J3QQQ9 107 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE7O76087 117 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE12FP0CL80 117 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE12GP0CL81 117 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 GAGE12IP0CL82 117 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 FOXI1Q12951 378 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 UFSP1Q6NVU6 142 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 MAPKAPK5-AS1Q8N8E1 139 aa7.12□□□□□ -1.27
COL21A1-201ENST00000244728 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 C5orf56Q8N8D9 126 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
COL21A1-201ENST00000244728 TRAV26-1A0A087WT03 109 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 HIST2H2BDQ6DRA6 164 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 RBAKDNA6NC62 111 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 MALP21145 153 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
COL21A1-201ENST00000244728 A0A096LPF7 62 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 GAS8-AS1O95177 125 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 DEFB113Q30KQ7 82 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 TIMM21Q9BVV7 248 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 U3KQK5 164 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 CRYGBP07316 175 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 LINC00158P58513 81 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 NTN5Q8WTR8 489 aaPredicted RBP7.1□□□□□ -1.27
COL21A1-201ENST00000244728 SIRPDQ9H106 197 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 TNRC6BQ9UPQ9 1833 aaKnown RBP7.1□□□□□ -1.27
COL21A1-201ENST00000244728 LGALS1P09382 135 aaKnown RBP7.1□□□□□ -1.27
COL21A1-201ENST00000244728 C3orf56Q8N813 242 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 TMEM141Q96I45 108 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 ELANEP08246 267 aa7.1□□□□□ -1.27
COL21A1-201ENST00000244728 TRAV8-3A0A0A6YYJ7 113 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 CFAP161Q6P656 301 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 B5MCH6 92 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 RNF185Q96GF1 192 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 ZNF48Q96MX3 618 aaPredicted RBP7.09□□□□□ -1.27
COL21A1-201ENST00000244728 J3QLI3 93 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 FSTL3O95633 263 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
COL21A1-201ENST00000244728 MUC3AQ02505 3323 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms