RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
RAB38-201ENST00000243662 FA2HQ7L5A8 372 aa11.29□□□□□ -0.6
RAB38-201ENST00000243662 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
RAB38-201ENST00000243662 UQCR10Q9UDW1 63 aa11.29□□□□□ -0.6
RAB38-201ENST00000243662 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 TWIST1Q15672 202 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 ZNF575Q86XF7 245 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 PRSS3P2Q8NHM4 247 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
RAB38-201ENST00000243662 TRBV7-9A0A0J9YWB2 115 aa11.27□□□□□ -0.6
RAB38-201ENST00000243662 IGLC3P0DOY3 106 aa11.27□□□□□ -0.6
RAB38-201ENST00000243662 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.6
RAB38-201ENST00000243662 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.6
RAB38-201ENST00000243662 X6R8D5 127 aa11.27□□□□□ -0.6
RAB38-201ENST00000243662 D6R8Y8 96 aa11.26□□□□□ -0.61
RAB38-201ENST00000243662 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
RAB38-201ENST00000243662 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
RAB38-201ENST00000243662 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
RAB38-201ENST00000243662 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
RAB38-201ENST00000243662 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
RAB38-201ENST00000243662 CDKN1BP46527 198 aa11.25□□□□□ -0.61
RAB38-201ENST00000243662 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
RAB38-201ENST00000243662 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
RAB38-201ENST00000243662 EREGO14944 169 aa11.25□□□□□ -0.61
RAB38-201ENST00000243662 CKS2P33552 79 aa11.25□□□□□ -0.61
RAB38-201ENST00000243662 CACNG7P62955 275 aa11.25□□□□□ -0.61
RAB38-201ENST00000243662 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
RAB38-201ENST00000243662 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
RAB38-201ENST00000243662 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
RAB38-201ENST00000243662 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
RAB38-201ENST00000243662 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
RAB38-201ENST00000243662 Q8NAQ8 132 aa11.24□□□□□ -0.61
RAB38-201ENST00000243662 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
RAB38-201ENST00000243662 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
RAB38-201ENST00000243662 A0A1B0GV90 55 aa11.23□□□□□ -0.61
RAB38-201ENST00000243662 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
RAB38-201ENST00000243662 TSPOP30536 169 aa11.23□□□□□ -0.61
RAB38-201ENST00000243662 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
RAB38-201ENST00000243662 WWC2-AS2Q96NR7 200 aa11.23□□□□□ -0.61
RAB38-201ENST00000243662 KLLNB2CW77 178 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 SNAI2O43623 268 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 INSP01308 110 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 MIFP14174 115 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 IFI27P40305 119 aaPredicted RBP11.22□□□□□ -0.61
RAB38-201ENST00000243662 LEPP41159 167 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 SSTP61278 116 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 ZFAND2AQ8N6M9 145 aa11.22□□□□□ -0.61
RAB38-201ENST00000243662 C11orf68Q9H3H3 251 aaKnown RBP11.22□□□□□ -0.61
RAB38-201ENST00000243662 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
RAB38-201ENST00000243662 A0A0J9YWU9 116 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 HSBP1L1C9JCN9 74 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 LINC01545Q5VT33 79 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 LINC00173Q6ZV60 143 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 RNF185Q96GF1 192 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.61
RAB38-201ENST00000243662 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 HNRNPA3P51991 378 aaKnown RBP11.2□□□□□ -0.62
RAB38-201ENST00000243662 Q6ZN92 141 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 LINC00469Q8N7U9 141 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
RAB38-201ENST00000243662 NXT2Q9NPJ8 142 aaKnown RBP11.2□□□□□ -0.62
RAB38-201ENST00000243662 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 SMIM9A6NGZ8 99 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 NPYP01303 97 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 HBDP02042 147 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 PRR9Q5T870 116 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 PRSS47A8MTI9 375 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 MSRB1Q9NZV6 116 aa11.19□□□□□ -0.62
RAB38-201ENST00000243662 LOC389332A0A1B0GUA5 103 aa11.18□□□□□ -0.62
RAB38-201ENST00000243662 C7orf71A4D174 169 aa11.18□□□□□ -0.62
RAB38-201ENST00000243662 J3KRW8 73 aa11.18□□□□□ -0.62
RAB38-201ENST00000243662 DEFB4AO15263 64 aa11.18□□□□□ -0.62
RAB38-201ENST00000243662 A0A096LNJ9 63 aa11.17□□□□□ -0.62
RAB38-201ENST00000243662 TRAV12-3A0A0B4J271 114 aa11.17□□□□□ -0.62
RAB38-201ENST00000243662 TNFRSF6BO95407 300 aa11.17□□□□□ -0.62
RAB38-201ENST00000243662 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
RAB38-201ENST00000243662 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
RAB38-201ENST00000243662 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
RAB38-201ENST00000243662 TMEM208Q9BTX3 173 aa11.17□□□□□ -0.62
RAB38-201ENST00000243662 PRM2P04554 102 aa11.16□□□□□ -0.62
RAB38-201ENST00000243662 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
RAB38-201ENST00000243662 LGALS9BQ3B8N2 356 aa11.16□□□□□ -0.62
RAB38-201ENST00000243662 SPANXN1Q5VSR9 72 aa11.16□□□□□ -0.62
RAB38-201ENST00000243662 LGALS9CQ6DKI2 356 aa11.16□□□□□ -0.62
RAB38-201ENST00000243662 MRAP2Q96G30 205 aa11.16□□□□□ -0.62
RAB38-201ENST00000243662 SMKR1H3BMG3 65 aa11.15□□□□□ -0.62
RAB38-201ENST00000243662 RNASE4P34096 147 aaKnown RBP11.15□□□□□ -0.62
RAB38-201ENST00000243662 ASIPP42127 132 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms