RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 C7orf71A4D174 169 aa9.94□□□□□ -0.82
USP5-201ENST00000229268 DEFB114Q30KQ6 69 aa9.94□□□□□ -0.82
USP5-201ENST00000229268 WFDC10AQ9H1F0 79 aa9.94□□□□□ -0.82
USP5-201ENST00000229268 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 TRAV8-6A0A0B4J262 113 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 TNFRSF6BO95407 300 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 MAST4O15021 2626 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
USP5-201ENST00000229268 Q8N1Y9 231 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 LENEPQ9Y5L5 61 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 OR4C46A6NHA9 309 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 CLUHP3Q96NS8 147 aa9.93□□□□□ -0.82
USP5-201ENST00000229268 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
USP5-201ENST00000229268 STAB1Q9NY15 2570 aa9.92□□□□□ -0.82
USP5-201ENST00000229268 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
USP5-201ENST00000229268 OR5AL1P0C617 328 aa9.92□□□□□ -0.82
USP5-201ENST00000229268 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
USP5-201ENST00000229268 TMEM70Q9BUB7 260 aa9.91□□□□□ -0.82
USP5-201ENST00000229268 KLLNB2CW77 178 aa9.91□□□□□ -0.82
USP5-201ENST00000229268 SCGB2A2Q13296 93 aa9.91□□□□□ -0.82
USP5-201ENST00000229268 MAP1LC3AQ9H492 121 aa9.91□□□□□ -0.82
USP5-201ENST00000229268 CHCHD1Q96BP2 118 aaKnown RBP9.91□□□□□ -0.82
USP5-201ENST00000229268 MAP6D1Q9H9H5 199 aa9.91□□□□□ -0.82
USP5-201ENST00000229268 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 FAM19A4Q96LR4 140 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 RBMY1A1P0DJD3 496 aaKnown RBP9.9□□□□□ -0.82
USP5-201ENST00000229268 RBMY1CP0DJD4 496 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 LEPP41159 167 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 RBMY1FQ15415 496 aaKnown RBP9.9□□□□□ -0.82
USP5-201ENST00000229268 BVES-AS1Q5T3Y7 98 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 FOXI2Q6ZQN5 318 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 OR2K2Q8NGT1 345 aa9.9□□□□□ -0.82
USP5-201ENST00000229268 RBMY1BA6NDE4 496 aaKnown RBP9.89□□□□□ -0.83
USP5-201ENST00000229268 RBMY1EA6NEQ0 496 aaKnown RBP9.89□□□□□ -0.83
USP5-201ENST00000229268 RBMY1DP0C7P1 496 aaKnown RBP9.89□□□□□ -0.83
USP5-201ENST00000229268 H3BMM0 161 aa9.89□□□□□ -0.83
USP5-201ENST00000229268 PF4P02776 101 aa9.89□□□□□ -0.83
USP5-201ENST00000229268 MAP1LC3CQ9BXW4 147 aa9.89□□□□□ -0.83
USP5-201ENST00000229268 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
USP5-201ENST00000229268 DUSP14O95147 198 aaKnown RBP9.89□□□□□ -0.83
USP5-201ENST00000229268 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
USP5-201ENST00000229268 LINC01587Q99440 93 aa9.89□□□□□ -0.83
USP5-201ENST00000229268 SYS1-DBNDD2H3BUS1 97 aa9.88□□□□□ -0.83
USP5-201ENST00000229268 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
USP5-201ENST00000229268 IGHV1OR15-1A0A075B7D0 117 aa9.88□□□□□ -0.83
USP5-201ENST00000229268 CIDEAO60543 219 aa9.88□□□□□ -0.83
USP5-201ENST00000229268 KRTAP10-3P60369 221 aa9.88□□□□□ -0.83
USP5-201ENST00000229268 K7ERU9 68 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 STHQ8IWL8 128 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 AMTNQ6UX39 209 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 A0A096LNJ9 63 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 PROK1P58294 105 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 CACNG7P62955 275 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 ZNF56Q15929 161 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
USP5-201ENST00000229268 CHTOPQ9Y3Y2 248 aaKnown RBP9.87□□□□□ -0.83
USP5-201ENST00000229268 TMEM158Q8WZ71 300 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 DPH3P1Q9H4G8 78 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 U3KQK5 164 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 OR11H12B2RN74 326 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 HLA-DRB4P13762 266 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 GATD1Q8NB37 220 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 ZNF256Q9Y2P7 627 aaPredicted RBP9.86□□□□□ -0.83
USP5-201ENST00000229268 HLA-DRB4X5D2U9 266 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
USP5-201ENST00000229268 PRSS1P07477 247 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 DEFB125Q8N687 156 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 SPATA3Q8NHX4 192 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 ZNF747Q9BV97 191 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 CRXO43186 299 aaPredicted RBP9.85□□□□□ -0.83
USP5-201ENST00000229268 HBDP02042 147 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 JMJD8Q96S16 334 aa9.85□□□□□ -0.83
USP5-201ENST00000229268 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
USP5-201ENST00000229268 NRACQ8N912 160 aa9.84□□□□□ -0.83
USP5-201ENST00000229268 RASL10AQ92737 203 aa9.84□□□□□ -0.83
USP5-201ENST00000229268 SPAG8Q99932 426 aaPredicted RBP9.84□□□□□ -0.83
USP5-201ENST00000229268 FHL3Q13643 280 aa9.83□□□□□ -0.84
USP5-201ENST00000229268 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
USP5-201ENST00000229268 HSBP1L1C9JCN9 74 aa9.83□□□□□ -0.84
USP5-201ENST00000229268 SLC25A34Q6PIV7 304 aa9.83□□□□□ -0.84
USP5-201ENST00000229268 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
USP5-201ENST00000229268 ADARB2-AS1A8MUL3 147 aa9.82□□□□□ -0.84
USP5-201ENST00000229268 P0DMU3 169 aa9.82□□□□□ -0.84
USP5-201ENST00000229268 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
USP5-201ENST00000229268 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
USP5-201ENST00000229268 IFI27L1Q96BM0 104 aa9.82□□□□□ -0.84
USP5-201ENST00000229268 AZU1P20160 251 aa9.82□□□□□ -0.84
USP5-201ENST00000229268 MRPL16Q9NX20 251 aaKnown RBP9.82□□□□□ -0.84
USP5-201ENST00000229268 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
USP5-201ENST00000229268 SUMO4Q6EEV6 95 aa9.81□□□□□ -0.84
USP5-201ENST00000229268 GTSF1LQ9H1H1 148 aa9.81□□□□□ -0.84
USP5-201ENST00000229268 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
USP5-201ENST00000229268 DKK2Q9UBU2 259 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms