RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 UFSP1Q6NVU6 142 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 A0A087WTM6 91 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 CCL20P78556 96 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 LINC01556Q5JQF7 62 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 BAGE2Q86Y30 109 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 MAPKAPK5-AS1Q8N8E1 139 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 S100A9P06702 114 aaKnown RBP9.58□□□□□ -0.88
GPN3-201ENST00000228827 RPL19P84098 196 aaKnown RBP9.58□□□□□ -0.88
GPN3-201ENST00000228827 PRR27Q6MZM9 219 aa9.58□□□□□ -0.88
GPN3-201ENST00000228827 SFRP2Q96HF1 295 aa9.58□□□□□ -0.88
GPN3-201ENST00000228827 Q9HAA7 133 aa9.58□□□□□ -0.88
GPN3-201ENST00000228827 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
GPN3-201ENST00000228827 GNG13Q9P2W3 67 aa9.58□□□□□ -0.88
GPN3-201ENST00000228827 RHODO00212 210 aa9.57□□□□□ -0.88
GPN3-201ENST00000228827 ZFP82Q8N141 532 aa9.57□□□□□ -0.88
GPN3-201ENST00000228827 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
GPN3-201ENST00000228827 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
GPN3-201ENST00000228827 PSCAO43653 123 aa9.56□□□□□ -0.88
GPN3-201ENST00000228827 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
GPN3-201ENST00000228827 Q8N3U1 123 aa9.56□□□□□ -0.88
GPN3-201ENST00000228827 MLST8Q9BVC4 326 aa9.56□□□□□ -0.88
GPN3-201ENST00000228827 RPL35P42766 123 aaKnown RBP9.55□□□□□ -0.88
GPN3-201ENST00000228827 Q6ZNX1 250 aa9.55□□□□□ -0.88
GPN3-201ENST00000228827 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
GPN3-201ENST00000228827 MANBALQ9NQG1 85 aa9.55□□□□□ -0.88
GPN3-201ENST00000228827 MUC21A0A0G2JKD1 596 aa9.54□□□□□ -0.88
GPN3-201ENST00000228827 MUC21A0A140T8X8 626 aa9.54□□□□□ -0.88
GPN3-201ENST00000228827 TCTE3Q8IZS6 198 aa9.54□□□□□ -0.88
GPN3-201ENST00000228827 RAB5CP51148 216 aa9.53□□□□□ -0.88
GPN3-201ENST00000228827 SSTP61278 116 aa9.53□□□□□ -0.88
GPN3-201ENST00000228827 EIF5AL1Q6IS14 154 aaKnown RBP9.53□□□□□ -0.88
GPN3-201ENST00000228827 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
GPN3-201ENST00000228827 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
GPN3-201ENST00000228827 SULT1A2P50226 295 aa9.53□□□□□ -0.88
GPN3-201ENST00000228827 TRAV1-1A0A0B4J248 108 aa9.52□□□□□ -0.89
GPN3-201ENST00000228827 TEX46H3BTG2 121 aa9.52□□□□□ -0.89
GPN3-201ENST00000228827 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
GPN3-201ENST00000228827 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
GPN3-201ENST00000228827 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
GPN3-201ENST00000228827 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 A0A087WWC5 75 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 C1QBP02746 253 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 CXCL1P09341 107 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 KRTAP10-1P60331 282 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 ZNF56Q15929 161 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 CENPWQ5EE01 88 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 SPANXN1Q5VSR9 72 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 Q8N1X5 172 aa9.51□□□□□ -0.89
GPN3-201ENST00000228827 RAB19A4D1S5 217 aa9.5□□□□□ -0.89
GPN3-201ENST00000228827 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
GPN3-201ENST00000228827 SNAI2O43623 268 aa9.5□□□□□ -0.89
GPN3-201ENST00000228827 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
GPN3-201ENST00000228827 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
GPN3-201ENST00000228827 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 IFNA1P01562 189 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 IGLV2-8P01709 118 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 GZMBP10144 247 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 LAGE3Q14657 143 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 TPPP3Q9BW30 176 aa9.49□□□□□ -0.89
GPN3-201ENST00000228827 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
GPN3-201ENST00000228827 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 F5H697 171 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 OR5AL1P0C617 328 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 GCSHP23434 173 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 GNG4P50150 75 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 RAB4BP61018 213 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 UBE2D3P61077 147 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 UBE2D2P62837 147 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 MEF2BQ02080 365 aaPredicted RBP9.48□□□□□ -0.89
GPN3-201ENST00000228827 OR2D3Q8NGH3 330 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 DAZAP1Q96EP5 407 aaKnown RBP9.48□□□□□ -0.89
GPN3-201ENST00000228827 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
GPN3-201ENST00000228827 TRBV7-3A0A075B6L6 115 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 RBFOX3A6NFN3 312 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 PDE6DO43924 150 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 BCL2P10415 239 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 AKAP14Q86UN6 197 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 NIT1Q86X76 327 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 Q8N814 137 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 NEXN-AS1Q8NBZ9 246 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 TM2D2Q9BX73 214 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 MED9Q9NWA0 146 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 XGP55808 180 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 TOR2AQ5JU69 321 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
GPN3-201ENST00000228827 LECT2O14960 151 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 SMIM17P0DL12 118 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 WFDC2Q14508 124 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 C9orf62Q8N4C0 152 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 VAX2Q9UIW0 290 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 KLK12Q9UKR0 248 aa9.46□□□□□ -0.9
GPN3-201ENST00000228827 TRBV20OR9-2A0A075B6H5 130 aa9.45□□□□□ -0.9
GPN3-201ENST00000228827 A0A087WX48 190 aa9.45□□□□□ -0.9
GPN3-201ENST00000228827 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms