RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 HILS1P60008 231 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 DEFB1P60022 68 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 TMEM14CQ9P0S9 112 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 ODF1Q14990 250 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 CD300EQ496F6 205 aaPredicted RBP8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 C19orf54Q5BKX5 351 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 TMEM190Q8WZ59 177 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 A0A1B0GV72 72 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 J3QR89 54 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 ZNF688P0C7X2 276 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 IGLL5B9A064 214 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 Q6ZQT7 251 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 CEND1Q8N111 149 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 NSD1Q96L73 2696 aaPredicted RBP8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 CLPSL1A2RUU4 121 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 H3BVH4 76 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 EMP1P54849 157 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 GAGE13Q4V321 117 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 PTH2Q96A98 100 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 ATP6V0BQ99437 205 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 IGHV7-4-1A0A0J9YVY3 117 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 LINC01619G3V211 115 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 DPM2O94777 84 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 RNASE1P07998 156 aaKnown RBP8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 TCTEX1D4Q5JR98 221 aa8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 SPANXB1Q9NS25 103 aaPredicted RBP8.86□□□□□ -0.99
TNFAIP1-201ENST00000226225 SMIM17P0DL12 118 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 CFHR3Q02985 330 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 TMEM78Q5T7P6 136 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 APOMO95445 188 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 PF4P02776 101 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 PRR25Q96S07 402 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 HHLA3Q9XRX5 114 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 SMAD5-AS1Q9Y6J3 95 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 Q6AWC8 147 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 MYOZ3Q8TDC0 251 aa8.85□□□□□ -0.99
TNFAIP1-201ENST00000226225 PRAC2D3DTV9 90 aa8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 PSMB2P49721 201 aa8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 A0A1B0GW15 77 aa8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 F6UB75 175 aa8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 SLC50A1Q9BRV3 221 aa8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 MRPL16Q9NX20 251 aaKnown RBP8.84□□□□□ -0.99
TNFAIP1-201ENST00000226225 PDE6HQ13956 83 aa8.84□□□□□ -1
TNFAIP1-201ENST00000226225 SCGB1D4Q6XE38 83 aa8.84□□□□□ -1
TNFAIP1-201ENST00000226225 FOXI2Q6ZQN5 318 aa8.84□□□□□ -1
TNFAIP1-201ENST00000226225 SYT8Q8NBV8 401 aa8.84□□□□□ -1
TNFAIP1-201ENST00000226225 CCL24O00175 119 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 SIVA1O15304 175 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 HTN1P15515 57 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 ID1P41134 155 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 OR10J6PQ8NGY7 276 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
TNFAIP1-201ENST00000226225 PEMTQ9UBM1 199 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 GPHB5Q86YW7 130 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
TNFAIP1-201ENST00000226225 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
TNFAIP1-201ENST00000226225 C16orf54Q6UWD8 224 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 LYPD1Q8N2G4 141 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 TMEM89A2RUT3 159 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 RNF185Q96GF1 192 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 H7C2G1 150 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 ANXA2RQ3ZCQ2 193 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 SPANXN1Q5VSR9 72 aa8.82□□□□□ -1
TNFAIP1-201ENST00000226225 SNRPD3P62318 126 aaKnown RBP8.81□□□□□ -1
TNFAIP1-201ENST00000226225 HLA-DRB4P13762 266 aa8.81□□□□□ -1
TNFAIP1-201ENST00000226225 GEMIN7Q9H840 131 aaKnown RBP8.81□□□□□ -1
TNFAIP1-201ENST00000226225 HLA-DRB4X5D2U9 266 aa8.81□□□□□ -1
TNFAIP1-201ENST00000226225 M0R381 172 aa8.81□□□□□ -1
TNFAIP1-201ENST00000226225 CRLF1O75462 422 aa8.81□□□□□ -1
TNFAIP1-201ENST00000226225 CRYBA4P53673 196 aa8.81□□□□□ -1
TNFAIP1-201ENST00000226225 PHLDA1Q8WV24 401 aaPredicted RBP8.81□□□□□ -1
TNFAIP1-201ENST00000226225 SVIPQ8NHG7 77 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 U3KQK5 164 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 LINC01549A6NIU2 74 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 E9PLD3 99 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 F8W1H4 67 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
TNFAIP1-201ENST00000226225 SPINK8P0C7L1 97 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 C4orf3Q8WVX3 66 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 OR11H12B2RN74 326 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 OR11H2Q8NH07 326 aa8.8□□□□□ -1
TNFAIP1-201ENST00000226225 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
TNFAIP1-201ENST00000226225 MT-ATP8P03928 68 aa8.79□□□□□ -1
TNFAIP1-201ENST00000226225 MGPP08493 103 aa8.79□□□□□ -1
TNFAIP1-201ENST00000226225 Q8N2B8 174 aa8.79□□□□□ -1
TNFAIP1-201ENST00000226225 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
TNFAIP1-201ENST00000226225 OVOL1O14753 267 aa8.79□□□□□ -1
TNFAIP1-201ENST00000226225 RAX2Q96IS3 184 aa8.79□□□□□ -1
TNFAIP1-201ENST00000226225 SCGB1C2P0DMR2 95 aa8.78□□□□□ -1
TNFAIP1-201ENST00000226225 RRN3P1Q2M238 152 aa8.78□□□□□ -1
TNFAIP1-201ENST00000226225 SCGB3A1Q96QR1 104 aa8.78□□□□□ -1
TNFAIP1-201ENST00000226225 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms