RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
TGFB1-201ENST00000221930 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
TGFB1-201ENST00000221930 AMTNQ6UX39 209 aa11.56□□□□□ -0.56
TGFB1-201ENST00000221930 CSDC2Q9Y534 153 aaKnown RBP11.56□□□□□ -0.56
TGFB1-201ENST00000221930 ABCA12Q86UK0 2595 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 NDUFA4O00483 81 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
TGFB1-201ENST00000221930 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 C14orf178Q8N769 122 aaPredicted RBP11.55□□□□□ -0.56
TGFB1-201ENST00000221930 MYOZ3Q8TDC0 251 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 USP24Q9UPU5 2620 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 IGHV4-4A0A075B6R2 117 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 DPM2O94777 84 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 EDN2P20800 178 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
TGFB1-201ENST00000221930 SOCS3O14543 225 aa11.54□□□□□ -0.56
TGFB1-201ENST00000221930 CRIP2P52943 208 aaPredicted RBP11.54□□□□□ -0.56
TGFB1-201ENST00000221930 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
TGFB1-201ENST00000221930 DOPEY2Q9Y3R5 2298 aa11.54□□□□□ -0.56
TGFB1-201ENST00000221930 K7EMI3 77 aa11.54□□□□□ -0.56
TGFB1-201ENST00000221930 GNRH2O43555 120 aa11.54□□□□□ -0.56
TGFB1-201ENST00000221930 SRSF1Q07955 248 aaKnown RBP eCLIP11.54□□□□□ -0.56
TGFB1-201ENST00000221930 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
TGFB1-201ENST00000221930 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 A4D1N5 150 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 ATP5LO75964 103 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 CFAP126Q5VTH2 177 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
TGFB1-201ENST00000221930 PHLDA3Q9Y5J5 127 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 DOPEY1Q5JWR5 2465 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 MXRA5Q9NR99 2828 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 TLN2Q9Y4G6 2542 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 TMEM262E9PQX1 116 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 IGHG2P01859 326 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 CEND1Q8N111 149 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 TMEM126AQ9H061 195 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 CREBBPQ92793 2442 aa11.53□□□□□ -0.56
TGFB1-201ENST00000221930 TRBV25-1A0A075B6N4 114 aa11.52□□□□□ -0.56
TGFB1-201ENST00000221930 CHAC1Q9BUX1 264 aa11.52□□□□□ -0.56
TGFB1-201ENST00000221930 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.56
TGFB1-201ENST00000221930 LENEPQ9Y5L5 61 aa11.52□□□□□ -0.56
TGFB1-201ENST00000221930 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
TGFB1-201ENST00000221930 MGPP08493 103 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 DEFB104AQ8WTQ1 72 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 RASL10AQ92737 203 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 OVOL1O14753 267 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 ASIPP42127 132 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 RRN3P1Q2M238 152 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 USMG5Q96IX5 58 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
TGFB1-201ENST00000221930 AVPP01185 164 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 SLC25A16P16260 332 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
TGFB1-201ENST00000221930 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 SORL1Q92673 2214 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 A6NDX4 124 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 IFITM1P13164 125 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 SUMO2P61956 95 aaKnown RBP11.5□□□□□ -0.57
TGFB1-201ENST00000221930 C12orf74Q32Q52 190 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 Q6Q795 121 aa11.5□□□□□ -0.57
TGFB1-201ENST00000221930 MUC4Q99102 2169 aa11.49□□□□□ -0.57
TGFB1-201ENST00000221930 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
TGFB1-201ENST00000221930 PTPN13Q12923 2485 aa11.49□□□□□ -0.57
TGFB1-201ENST00000221930 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
TGFB1-201ENST00000221930 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
TGFB1-201ENST00000221930 AGRNO00468 2067 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 CARD19Q96LW7 228 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 MSMBP08118 114 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 TAL2Q16559 108 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 SCGB3A1Q96QR1 104 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 DAZ1Q9NQZ3 744 aaKnown RBP11.48□□□□□ -0.57
TGFB1-201ENST00000221930 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
TGFB1-201ENST00000221930 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
TGFB1-201ENST00000221930 C10orf99Q6UWK7 81 aa11.47□□□□□ -0.57
TGFB1-201ENST00000221930 FAM159AQ6UWV7 190 aa11.47□□□□□ -0.57
TGFB1-201ENST00000221930 TEN1Q86WV5 123 aa11.47□□□□□ -0.57
TGFB1-201ENST00000221930 KIR2DL4Q99706 377 aa11.47□□□□□ -0.57
TGFB1-201ENST00000221930 FBN2P35556 2912 aa11.47□□□□□ -0.57
TGFB1-201ENST00000221930 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
TGFB1-201ENST00000221930 IGLV1-40P01703 118 aa11.46□□□□□ -0.57
TGFB1-201ENST00000221930 MEIG1Q5JSS6 88 aa11.46□□□□□ -0.57
TGFB1-201ENST00000221930 DNAJC30Q96LL9 226 aa11.46□□□□□ -0.57
TGFB1-201ENST00000221930 JPT2Q9H910 190 aa11.46□□□□□ -0.57
TGFB1-201ENST00000221930 RNF223E7ERA6 249 aa11.46□□□□□ -0.58
TGFB1-201ENST00000221930 H3BUA1 57 aa11.46□□□□□ -0.58
TGFB1-201ENST00000221930 ANKRD17O75179 2603 aaKnown RBP11.46□□□□□ -0.58
TGFB1-201ENST00000221930 SMIM9A6NGZ8 99 aa11.45□□□□□ -0.58
TGFB1-201ENST00000221930 PRB1P04280 392 aa11.45□□□□□ -0.58
TGFB1-201ENST00000221930 ORMDL2Q53FV1 153 aa11.45□□□□□ -0.58
TGFB1-201ENST00000221930 B4DSR2 109 aa11.45□□□□□ -0.58
TGFB1-201ENST00000221930 J3QLI3 93 aa11.45□□□□□ -0.58
TGFB1-201ENST00000221930 PLNP26678 52 aa11.45□□□□□ -0.58
TGFB1-201ENST00000221930 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
TGFB1-201ENST00000221930 TOMM6Q96B49 74 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms