RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CELSR1Q9NYQ6 3014 aa9.92□□□□□ -0.82
SRP54-201ENST00000216774 IGHV3-16A0A0C4DH30 117 aa9.92□□□□□ -0.82
SRP54-201ENST00000216774 EDN2P20800 178 aa9.92□□□□□ -0.82
SRP54-201ENST00000216774 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
SRP54-201ENST00000216774 CD300EQ496F6 205 aaPredicted RBP9.92□□□□□ -0.82
SRP54-201ENST00000216774 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
SRP54-201ENST00000216774 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
SRP54-201ENST00000216774 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
SRP54-201ENST00000216774 SYT8Q8NBV8 401 aa9.91□□□□□ -0.82
SRP54-201ENST00000216774 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
SRP54-201ENST00000216774 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
SRP54-201ENST00000216774 SNRPD3P62318 126 aaKnown RBP9.91□□□□□ -0.82
SRP54-201ENST00000216774 RPL39P62891 51 aaKnown RBP9.91□□□□□ -0.82
SRP54-201ENST00000216774 A0A0J9YX75 114 aa9.9□□□□□ -0.82
SRP54-201ENST00000216774 B4DSR2 109 aa9.9□□□□□ -0.82
SRP54-201ENST00000216774 GATA3P23771 443 aa9.9□□□□□ -0.82
SRP54-201ENST00000216774 ZNF876PQ49A33 203 aa9.9□□□□□ -0.82
SRP54-201ENST00000216774 KLHL30-AS1Q8NEE0 82 aa9.9□□□□□ -0.82
SRP54-201ENST00000216774 ZFHX3Q15911 3703 aa9.9□□□□□ -0.82
SRP54-201ENST00000216774 A0A0J9YY99 117 aa9.9□□□□□ -0.83
SRP54-201ENST00000216774 TMEM238C9JI98 176 aa9.9□□□□□ -0.83
SRP54-201ENST00000216774 RHOHQ15669 191 aa9.9□□□□□ -0.83
SRP54-201ENST00000216774 ETDBQ3ZM63 59 aa9.9□□□□□ -0.83
SRP54-201ENST00000216774 M0QY20 66 aa9.89□□□□□ -0.83
SRP54-201ENST00000216774 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
SRP54-201ENST00000216774 NSUN5P1Q3KNT7 163 aa9.89□□□□□ -0.83
SRP54-201ENST00000216774 WFDC12Q8WWY7 111 aa9.89□□□□□ -0.83
SRP54-201ENST00000216774 AVPP01185 164 aa9.89□□□□□ -0.83
SRP54-201ENST00000216774 TMEM95Q3KNT9 176 aa9.89□□□□□ -0.83
SRP54-201ENST00000216774 DLX4Q92988 240 aaPredicted RBP9.89□□□□□ -0.83
SRP54-201ENST00000216774 SPTAN1Q13813 2472 aaKnown RBP9.88□□□□□ -0.83
SRP54-201ENST00000216774 K7EQG2 157 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 EMP1P54849 157 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 FAM74A4Q5TZK3 123 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 SH2D6Q7Z4S9 175 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 TRPT1Q86TN4 253 aaKnown RBP9.88□□□□□ -0.83
SRP54-201ENST00000216774 Q8N1Y9 231 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 MDFICQ9P1T7 246 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 PIEZO1Q92508 2521 aa9.88□□□□□ -0.83
SRP54-201ENST00000216774 IGHV1OR15-1A0A075B7D0 117 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 SCGB1A1P11684 91 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 ZNF56Q15929 161 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 LYRM7Q5U5X0 104 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 NFE4Q86UQ8 179 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 ZNRF2Q8NHG8 242 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 TSPAN13O95857 204 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
SRP54-201ENST00000216774 SPAG8Q99932 426 aaPredicted RBP9.87□□□□□ -0.83
SRP54-201ENST00000216774 TSSC4Q9Y5U2 329 aaPredicted RBP9.87□□□□□ -0.83
SRP54-201ENST00000216774 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 DSCR9P59020 149 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 UBE2D3P61077 147 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 UBE2D2P62837 147 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 NDUFA11Q86Y39 141 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 SPATA25Q9BR10 227 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 ZNF256Q9Y2P7 627 aaPredicted RBP9.86□□□□□ -0.83
SRP54-201ENST00000216774 J3QQQ9 107 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 IGHV3-30P01768 117 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 IGHV4-59P01825 116 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 IGHV3-30-5P0DP03 117 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 TSPEAR-AS2P59090 65 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 CFAP126Q5VTH2 177 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 ATP6V0E2Q8NHE4 81 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 AMELXQ99217 191 aa9.86□□□□□ -0.83
SRP54-201ENST00000216774 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 SPTBN4Q9H254 2564 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 CHD8Q9HCK8 2581 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 NCOR2Q9Y618 2525 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 IGKV3-20P01619 116 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 DEFB112Q30KQ8 113 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 VPS13CQ709C8 3753 aa9.85□□□□□ -0.83
SRP54-201ENST00000216774 TRGV11A0A075B6L2 103 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 LGALS3P17931 250 aaKnown RBP9.84□□□□□ -0.83
SRP54-201ENST00000216774 AZU1P20160 251 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 SPINK13Q1W4C9 94 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 LOC107984156A0A0G2JMH3 177 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 I3L3M4 83 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 APOMO95445 188 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 C10orf99Q6UWK7 81 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 ARL17AQ8IVW1 177 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 C20orf203Q8NBC4 194 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
SRP54-201ENST00000216774 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
SRP54-201ENST00000216774 LEPROTO15243 131 aa9.83□□□□□ -0.84
SRP54-201ENST00000216774 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
SRP54-201ENST00000216774 EDA2RQ9HAV5 297 aa9.83□□□□□ -0.84
SRP54-201ENST00000216774 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 CFC1BP0CG36 223 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 CFC1P0CG37 223 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 P0DMU3 169 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 SYNJ2BPP57105 145 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 PSMB2P49721 201 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms