RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 NAV3Q8IVL0 2385 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 E7EUB6 86 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 TIRAPP58753 221 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 ZNF702PQ9H963 129 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 TRAV12-1A0A0B4J245 112 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 DEFB105AQ8NG35 78 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 V9GYV3 84 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 ZNF492Q9P255 531 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 PKIGQ9Y2B9 76 aa10.54□□□□□ -0.72
SIX4-201ENST00000216513 MED12LQ86YW9 2145 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 ODF3L1Q8IXM7 274 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
SIX4-201ENST00000216513 CFPP27918 469 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
SIX4-201ENST00000216513 PRSS46E5RG02 174 aa10.52□□□□□ -0.73
SIX4-201ENST00000216513 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
SIX4-201ENST00000216513 SNHG12Q9BXW3 62 aa10.52□□□□□ -0.73
SIX4-201ENST00000216513 IGF1P05019 195 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 TNCP24821 2201 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 IGKV1-17P01599 117 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
SIX4-201ENST00000216513 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 KLK12Q9UKR0 248 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 EML6Q6ZMW3 1958 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 AVPP01185 164 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 FAM222AQ5U5X8 452 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 TANC2Q9HCD6 1990 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 FAM231BA6NCW3 169 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 KLF12Q9Y4X4 402 aa10.51□□□□□ -0.73
SIX4-201ENST00000216513 LRCOL1A6NCL2 159 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 CRYGCP07315 174 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 LINC00173Q6ZV60 143 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 CENPFP49454 3210 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
SIX4-201ENST00000216513 FAM104BQ5XKR9 115 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 Q8N1Y9 231 aa10.5□□□□□ -0.73
SIX4-201ENST00000216513 ZNF124Q15973 351 aa10.49□□□□□ -0.73
SIX4-201ENST00000216513 TINCRA0A1B0GVN0 87 aa10.49□□□□□ -0.73
SIX4-201ENST00000216513 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
SIX4-201ENST00000216513 DAND5Q8N907 189 aa10.49□□□□□ -0.73
SIX4-201ENST00000216513 WNK1Q9H4A3 2382 aa10.49□□□□□ -0.73
SIX4-201ENST00000216513 PLA2G2EQ9NZK7 142 aa10.48□□□□□ -0.73
SIX4-201ENST00000216513 MUC22E2RYF6 1773 aaPredicted RBP10.48□□□□□ -0.73
SIX4-201ENST00000216513 PCNTO95613 3336 aa10.48□□□□□ -0.73
SIX4-201ENST00000216513 CCDC140Q96MF4 163 aa10.48□□□□□ -0.73
SIX4-201ENST00000216513 PSMG3-AS1Q96PY0 264 aa10.48□□□□□ -0.73
SIX4-201ENST00000216513 LY96Q9Y6Y9 160 aa10.48□□□□□ -0.73
SIX4-201ENST00000216513 TAL2Q16559 108 aa10.48□□□□□ -0.73
SIX4-201ENST00000216513 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
SIX4-201ENST00000216513 GFRA4Q9GZZ7 299 aa10.47□□□□□ -0.73
SIX4-201ENST00000216513 GTSF1Q8WW33 167 aa10.47□□□□□ -0.73
SIX4-201ENST00000216513 NUPR1O60356 82 aa10.47□□□□□ -0.73
SIX4-201ENST00000216513 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
SIX4-201ENST00000216513 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.73
SIX4-201ENST00000216513 RBAKDNA6NC62 111 aa10.46□□□□□ -0.73
SIX4-201ENST00000216513 DLEU1O43261 78 aa10.46□□□□□ -0.73
SIX4-201ENST00000216513 Q6ZS46 218 aa10.46□□□□□ -0.73
SIX4-201ENST00000216513 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
SIX4-201ENST00000216513 WFDC10AQ9H1F0 79 aa10.46□□□□□ -0.73
SIX4-201ENST00000216513 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
SIX4-201ENST00000216513 NPSP0C0P6 89 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 PRO0255Q9UI72 69 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 SMIM27A0A1W2PRY6 76 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 HAMPP81172 84 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 A0A1W2PPR1 153 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
SIX4-201ENST00000216513 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 COL5A1P20908 1838 aaPredicted RBP10.44□□□□□ -0.74
SIX4-201ENST00000216513 CRYGDP07320 174 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 WI2-2373I1.2A0A1W2PRP0 233 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 Q8N8P6 123 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
SIX4-201ENST00000216513 NDUFA7O95182 113 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 PRR20EP86478 221 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 PRR20CP86479 221 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 PRR20DP86480 221 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 PRR20BP86481 221 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 PRR20AP86496 221 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 SPTBN4Q9H254 2564 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 UBE2AP49459 152 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 PRR14LQ5THK1 2151 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.43□□□□□ -0.74
SIX4-201ENST00000216513 IGHV4-28A0A0C4DH34 117 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 A0A0J9YX75 114 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 COX7A2LO14548 114 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms