RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 SBF1O95248 1867 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PLXNA3P51805 1871 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 NUP210Q8TEM1 1887 aaPredicted RBP0.3□□□□□ -2.36
CDKN3-201ENST00000216414 CAMSAP1Q5T5Y3 1602 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 MYH7BA7E2Y1 1941 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PTPRFP10586 1907 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PTPRDP23468 1912 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 DOCK4Q8N1I0 1966 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PBRM1Q86U86 1689 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 BCORL1Q5H9F3 1711 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 PEAK1Q9H792 1746 aa0.3□□□□□ -2.36
CDKN3-201ENST00000216414 ARHGAP32A7KAX9 2087 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 MYO18AQ92614 2054 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 STRCP1A6NGW2 1772 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 FREM3P0C091 2139 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 TCOF1Q13428 1488 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF518AQ6AHZ1 1483 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CECR2Q9BXF3 1484 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CPAMD8Q8IZJ3 1885 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 GBF1Q92538 1859 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 DIDO1Q9BTC0 2240 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PCF11O94913 1555 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 MYH2Q9UKX2 1941 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 MYH9P35579 1960 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 TRAV22A0A0B4J277 110 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 LOC101927531A0A1B0GV80 90 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 A0A1B0GWA3 101 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM218A2RU14 115 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CRYM-AS1A6NIL9 109 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 H3BQ15 152 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 UQCR11O14957 56 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SPINK4O60575 86 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CYB5AP00167 134 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CLPSP04118 112 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 NMBP08949 121 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 IGLC6P0CF74 106 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SLC25A6P12236 298 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 RNASE3P12724 160 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SNCAP37840 140 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 EFNA4P52798 201 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 GNG11P61952 73 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PPP3R1P63098 170 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 GNGT1P63211 74 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 HAMPP81172 84 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PRB3Q04118 309 aaPredicted RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CATR1Q13166 79 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 INSL4Q14641 139 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PEA15Q15121 130 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PMCHL1Q16048 86 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 S100A7L2Q5SY68 101 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 KRTAP26-1Q6PEX3 210 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SFTA2Q6UW10 78 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ALKAL2Q6UX46 152 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PATE2Q6UY27 113 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 Q6ZUT4 128 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 VMO1Q7Z5L0 202 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 BAGE2Q86Y30 109 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 C20orf197Q8N268 126 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 LINC00269Q8N2A0 174 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CCL4L1Q8NHW4 92 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 Q8TAT8 98 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 IFI27L1Q96BM0 104 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SDF2Q99470 211 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 LINC00470Q9BZP3 86 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PROK2Q9HC23 129 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 DYNLRB1Q9NP97 96 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 MANBALQ9NQG1 85 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SCN3BQ9NY72 215 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 NDUFA12Q9UI09 145 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 LENEPQ9Y5L5 61 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 DNAJC15Q9Y5T4 150 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 FN1P02751 2386 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ARHGEF28Q8N1W1 1705 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 SPTBP11277 2137 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 IBTKQ9P2D0 1353 aaPredicted RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 MALRD1Q5VYJ5 2156 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 MED13Q9UHV7 2174 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ASCC3Q8N3C0 2202 aaKnown RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF609O15014 1411 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 PRG4Q92954 1404 aaPredicted RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 ERBINQ96RT1 1412 aa0.29□□□□□ -2.36
CDKN3-201ENST00000216414 CDK12Q9NYV4 1490 aaPredicted RBP0.29□□□□□ -2.36
CDKN3-201ENST00000216414 TCHHQ07283 1943 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 MAPKBP1O60336 1514 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 CDK13Q14004 1512 aaKnown RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 NISCHQ9Y2I1 1504 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 ZFC3H1O60293 1989 aaKnown RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 KIAA1549Q9HCM3 1950 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 CITO14578 2027 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 FANCMQ8IYD8 2048 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 REREQ9P2R6 1566 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF469Q96JG9 3925 aaPredicted RBP0.28□□□□□ -2.36
CDKN3-201ENST00000216414 COL4A2P08572 1712 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 POLEQ07864 2286 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 ADAMTSL1Q8N6G6 1762 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 TRAV30A0A087WSZ9 112 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 UQCRHLA0A096LP55 91 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF815PA8K554 130 aa0.28□□□□□ -2.36
CDKN3-201ENST00000216414 C10orf142B7Z368 130 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms