RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 RASL10AQ92737 203 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 JPT2Q9H910 190 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 H7C1H1 209 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 SLC25A16P16260 332 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
CTNS-201ENST00000046640 Q5PR19 223 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 KLHL30-AS1Q8NEE0 82 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 APCP25054 2843 aa9.84□□□□□ -0.83
CTNS-201ENST00000046640 DEFB136Q30KP8 78 aa9.84□□□□□ -0.83
CTNS-201ENST00000046640 CD300EQ496F6 205 aaPredicted RBP9.84□□□□□ -0.83
CTNS-201ENST00000046640 NBPF19A0A087WUL8 3843 aa9.84□□□□□ -0.83
CTNS-201ENST00000046640 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
CTNS-201ENST00000046640 F8VRH5 84 aa9.84□□□□□ -0.83
CTNS-201ENST00000046640 HOXA3O43365 443 aaPredicted RBP9.84□□□□□ -0.83
CTNS-201ENST00000046640 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
CTNS-201ENST00000046640 MUC4Q99102 2169 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 A0A096LNT2 108 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 INSL3P51460 131 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 DSCR9P59020 149 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 FOXI2Q6ZQN5 318 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 C18orf65Q6ZTR6 163 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 DUX3Q96PT4 197 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 WNK1Q9H4A3 2382 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 E9PLD3 99 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 PLNP26678 52 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 ZNF843Q8N446 348 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 DCANP1Q8TF63 244 aa9.83□□□□□ -0.84
CTNS-201ENST00000046640 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
CTNS-201ENST00000046640 GATA3P23771 443 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 A0A087WWL8 130 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 MYMXA0A1B0GTQ4 84 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 HLA-DRB4P13762 266 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 PLEKHB2Q96CS7 222 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
CTNS-201ENST00000046640 LENEPQ9Y5L5 61 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 HLA-DRB4X5D2U9 266 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 NOTCH3Q9UM47 2321 aa9.82□□□□□ -0.84
CTNS-201ENST00000046640 IGHV4OR15-8A0A075B7B6 117 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 A0A087WW49 117 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 PRSS29PA6NIE9 313 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 ZNF815PA8K554 130 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 CD7P09564 240 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 HTN1P15515 57 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNS-201ENST00000046640 SVIPQ8NHG7 77 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 PRADC1Q9BSG0 188 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 ACANP16112 2415 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 F5H697 171 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 DUSP14O95147 198 aaKnown RBP9.81□□□□□ -0.84
CTNS-201ENST00000046640 APOMO95445 188 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 SCGB1A1P11684 91 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 HIST2H2BCQ6DN03 193 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 LOC107984156A0A0G2JMH3 177 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 LGALS1P09382 135 aaKnown RBP9.81□□□□□ -0.84
CTNS-201ENST00000046640 ARL17AQ8IVW1 177 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 DPH3P1Q9H4G8 78 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
CTNS-201ENST00000046640 IGHV4-4A0A075B6R2 117 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 ID1P41134 155 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 KHDC1LQ5JSQ8 128 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 CHD6Q8TD26 2715 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 BRI3O95415 125 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 RPL39P62891 51 aaKnown RBP9.8□□□□□ -0.84
CTNS-201ENST00000046640 SPINK13Q1W4C9 94 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 FAM19A4Q96LR4 140 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 SPAG8Q99932 426 aaPredicted RBP9.8□□□□□ -0.84
CTNS-201ENST00000046640 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
CTNS-201ENST00000046640 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 ITPR3Q14573 2671 aa9.8□□□□□ -0.84
CTNS-201ENST00000046640 TRBV7-3A0A075B6L6 115 aa9.79□□□□□ -0.84
CTNS-201ENST00000046640 A0A1B0GV72 72 aa9.79□□□□□ -0.84
CTNS-201ENST00000046640 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
CTNS-201ENST00000046640 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
CTNS-201ENST00000046640 Q96MF0 132 aa9.79□□□□□ -0.84
CTNS-201ENST00000046640 LINC01549A6NIU2 74 aa9.79□□□□□ -0.84
CTNS-201ENST00000046640 HOXD3P31249 432 aaPredicted RBP9.79□□□□□ -0.84
CTNS-201ENST00000046640 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
CTNS-201ENST00000046640 MDFICQ9P1T7 246 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 FLNAP21333 2647 aaKnown RBP9.78□□□□□ -0.84
CTNS-201ENST00000046640 F8W1H4 67 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 J3QR89 54 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 K7EMT4 169 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 PRM2P04554 102 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 PSMB2P49721 201 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 SLURP1P55000 103 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 MTORP42345 2549 aa9.78□□□□□ -0.84
CTNS-201ENST00000046640 ZNF702PQ9H963 129 aa9.77□□□□□ -0.84
CTNS-201ENST00000046640 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms