RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Trappc2lQ9JME7 139 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Bcl3Q9Z2F6 448 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ighv6-3A0A075B5T2 118 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm2026A2ART4 498 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr715bE9Q725 315 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Klf12O35738 402 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Rab33bO35963 229 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 P01798 113 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mtnd6P03925 172 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ccl1P10146 92 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 P18525 117 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Rnd3P61588 244 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gpr183Q3U6B2 357 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Pafah1b2Q61206 229 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Rgs13Q8K443 158 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr810Q8VFH9 312 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr715Q8VG49 315 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ms4a6cQ99N08 217 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Anapc16Q9CPV2 110 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mrps16Q9CPX7 135 aaKnown RBP5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ackr1Q9QUI6 334 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Timm9Q9WV98 89 aaKnown RBP5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ccl17F6R5P4 103 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Efnb1P52795 345 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Rims4P60191 269 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 UcnP81615 122 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm5150Q1AN92 299 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q3U595 105 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 BC147527Q3V185 167 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tmprss13Q5U405 543 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Btf3Q64152 204 aaKnown RBP5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cd52Q64389 74 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q8CF25 301 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Prss45Q8K4I7 317 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr279Q8VFD8 310 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Epdr1Q99M71 224 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Shisal2bQ9D1Y9 158 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Igkv12-89A0A0G2JGW8 112 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Smim13E9Q942 88 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm20708H3BKF4 155 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm933J3QPC1 141 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm28044L7N1X0 119 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mef2bO55087 349 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Il4P07750 140 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gcm1P70348 436 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Slc38a11Q3USY0 453 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm10840Q3V2K9 103 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tnfsf18Q7TS55 173 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 9930022D16RikQ8BG27 128 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mbnl2Q8C181 373 aaKnown RBP5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Aqp6Q8C4A0 293 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Neil3Q8K203 606 aaKnown RBP5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tmem144Q8VEH0 348 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mrps36Q9CQX8 102 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cox20Q9D7J4 117 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cmtm2bQ9DAC0 210 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Naa60Q9DBU2 242 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hspb8Q9JK92 196 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tex15F8VPN2 2785 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tcrg-V4A0A0B4J1J8 138 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lnp1A0A1B0GSK3 178 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Pwwp2bE9Q9M8 600 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 P2ry1P49650 373 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tpsab1Q02844 273 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm11110Q3U4K9 109 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Neil2Q6R2P8 329 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr987Q7TRA2 309 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 ClmQ7TSN2 230 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Immp2lQ8BPT6 175 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Anapc13Q8R034 74 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Slc50a1Q9CXK4 221 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 1700013G24RikQ9DAC6 286 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Vmn1r149E9PWL6 307 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Vmn1r101E9Q365 307 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr609E9Q4X7 319 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Vmn1r158G3UY92 307 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lynx1P0DP60 116 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Defa2P28309 93 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 F2rl1P55086 399 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Rps11P62281 158 aaKnown RBP5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Znf575Q3TXZ1 239 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Olfr1362Q5SZZ8 308 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Htr1dQ61224 374 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm5868Q8BJG1 145 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q91WE4 72 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cds2Q99L43 444 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 ManfQ9CXI5 179 aaKnown RBP5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gp2Q9D733 531 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Nbeal2Q6ZQA0 2742 aa5.7□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm36368A0A1D5RLK8 91 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Irf2bp2E9Q1P8 570 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Hist1h1bP43276 223 aaKnown RBP5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lrrc52Q5M8M9 314 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Q80X32 188 aaKnown RBP5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Rnf151Q9CQ29 239 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 MmdQ9CQY7 238 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mtfp1Q9CRB8 166 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Mrpl13Q9D1P0 178 aaKnown RBP5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Lelp1Q9DAE3 120 aa5.69□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ighv1-81A0A075B5Y4 117 aa5.69□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms