RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 StumQ0VBF8 141 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Prdx2Q61171 198 aaKnown RBP9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 RflnaQ7TS73 204 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Bricd5Q8BV89 174 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Vmn1r237Q8R296 289 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1323Q8VF35 309 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gpa33Q9JKA5 319 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fhl3Q9R059 289 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 DysfQ9ESD7 2090 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ighv1-34A0A075B5V2 117 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Defa30E9QPZ2 93 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tmem167bQ80X45 74 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Prr15Q9D1T5 122 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Chst5Q9QUP4 395 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Trav12d-1A0N8R0 115 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Efnb3O35393 340 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 P01660 111 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Bmpr1bP36898 502 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 4930474N05RikQ8BVR5 218 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1454Q8VFW2 307 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fxyd4Q9D2W0 88 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fer1l4A3KGK3 1992 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tanc2A2A690 1994 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm28171A0A087WQ19 227 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Efna2P52801 209 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Znf22Q9ERU3 237 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 P01789 122 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Hoxa6P09092 232 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Lyplal1Q3UFF7 239 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rnps1Q99M28 305 aaKnown RBP9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Trav7-4A0A075B6C1 113 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Sertad4A7DTG3 377 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Casp16-psI6L890 176 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Phxr2P15972 65 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Trav7d-4Q5R1H9 113 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tob1Q61471 362 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ifna11Q61716 190 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Dusp23Q6NT99 150 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Prss28Q924N9 274 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ube2cQ9D1C1 179 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Prss30Q9QYZ9 310 aa9.43□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rhox7bA6PW38 321 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Psg18B2RSG7 476 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm15056F6ZR08 88 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm26965M0QWH4 86 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Defa9P50707 93 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Atp5g2P56383 146 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Il22ra2Q80XF5 230 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 PigpQ9JHG1 132 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Zglp1Q1WG82 266 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Trav3-3Q5R1C3 114 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 ChtopQ9CY57 249 aaKnown RBP9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 GgctQ9D7X8 188 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Cd200r1Q9ES57 326 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Trav6-1A0A075B5Z8 112 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm5129F6YHA9 99 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ankrd55Q8BLD6 626 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Vmn1r179Q8R2B4 323 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Q8VC23 124 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr123Q8VFQ1 309 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Cldn16Q925N4 235 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm19684G3UZ45 117 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 KncnQ307W7 124 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tmem140Q8BGY5 185 aa9.42□□□□□ -0.9
Topbp1-201ENSMUST00000035164 ErhP84089 104 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tctn2Q2MV57 700 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Zfp936Q3ULA8 456 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Znf329Q6GQR8 522 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ptrh2Q8R2Y8 181 aaKnown RBP9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Spsb4Q8R5B6 273 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ighv1-36A0A0A6YXT2 117 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ceacam15A0A0B4J1L0 234 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr912A0A1L1SSS5 310 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 UngP97931 306 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gpank1Q61858 372 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Znrf2Q71FD5 238 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1437Q7TQR7 312 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1441Q8VFV3 318 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 VsirQ9D659 308 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Inafm1E9PV59 130 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm27021M0QWE2 156 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rnase9P60154 184 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Dynlrb1P62627 96 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Defb28Q3V2L0 89 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fam213bQ9DB60 201 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr894Q9EQB2 313 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Crim1Q9JLL0 1037 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Igkv13-85A0A075B666 115 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 A930017K11RikE0CXQ2 571 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Vmn1r119E9Q4H3 307 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Emp2O88662 172 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ucp1P12242 307 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 G0s2Q61585 103 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Higd1bQ99JY6 98 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fam162bQ9CX19 157 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Lama1P19137 3084 aa9.41□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Adamts20P59511 1906 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ighv5-4A0A075B5P9 117 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1179A2AUS6 307 aa9.4□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Trdv4Q5R1A3 115 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 336.1 ms