RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 LEAP2Q969E1 77 aa4.55□□□□□ -1.68
CASC19-260ENST00000641828 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
CASC19-260ENST00000641828 MTORP42345 2549 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 ANKHD1Q8IWZ3 2542 aaKnown RBP4.54□□□□□ -1.68
CASC19-260ENST00000641828 IGHV5-10-1A0A0J9YXX1 117 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 SRRM5B3KS81 715 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 E7EUB6 86 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 F8VRH5 84 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 H3BVH4 76 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 H7C1H1 209 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 IGHV3-48P01763 117 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.681e-6■□□□□ 9.5
CASC19-260ENST00000641828 MRPL23Q16540 153 aaKnown RBP4.54□□□□□ -1.68
CASC19-260ENST00000641828 PVRIGQ6DKI7 326 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 COX8CQ7Z4L0 72 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 RASL10AQ92737 203 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 RNF185Q96GF1 192 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 SPANXDQ9BXN6 97 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 FZR1Q9UM11 496 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 CELSR2Q9HCU4 2923 aa4.54□□□□□ -1.68
CASC19-260ENST00000641828 TRBV19A0A075B6N1 114 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 PINLYPA6NC86 204 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SLC25A20O43772 301 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 TIMM8AO60220 97 aaPredicted RBP4.53□□□□□ -1.68
CASC19-260ENST00000641828 NDUFA3O95167 84 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
CASC19-260ENST00000641828 CD7P09564 240 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 LAGE3Q14657 143 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SPRNQ5BIV9 151 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 UTF1Q5T230 341 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 TMEM78Q5T7P6 136 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 NDUFA11Q86Y39 141 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 ZGRF1Q86YA3 2104 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 ZNRF1Q8ND25 227 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 LINC01600Q96MT4 127 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 CNFNQ9BYD5 112 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 PPDPFQ9H3Y8 114 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 LINC00574Q9H8X3 128 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 IGLV2-18A0A075B6J9 118 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 TMSB15BA0A087X1C1 80 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 TIMM23O14925 209 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SH2D1AO60880 128 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 CRLF1O75462 422 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SCGB2A1O75556 95 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 CEACAM4O75871 244 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 IGLC6P0CF74 106 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 PROK1P58294 105 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SIGLEC15Q6ZMC9 328 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 ZNF833PQ6ZTB9 187 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 Q71RC1 249 aaPredicted RBP4.53□□□□□ -1.68
CASC19-260ENST00000641828 DNAJC30Q96LL9 226 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SPRY4Q9C004 299 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 NGBQ9NPG2 151 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 PROCRQ9UNN8 238 aa4.53□□□□□ -1.68
CASC19-260ENST00000641828 HIVEP3Q5T1R4 2406 aa4.53□□□□□ -1.69
CASC19-260ENST00000641828 DNHD1Q96M86 4753 aa4.52□□□□□ -1.69
CASC19-260ENST00000641828 ABCA1O95477 2261 aa4.52□□□□□ -1.69
CASC19-260ENST00000641828 COL27A1Q8IZC6 1860 aaPredicted RBP4.52□□□□□ -1.69
CASC19-260ENST00000641828 PDZD2O15018 2839 aa4.52□□□□□ -1.69
CASC19-260ENST00000641828 SCGB1D4Q6XE38 83 aa4.52□□□□□ -1.69
CASC19-260ENST00000641828 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
CASC19-260ENST00000641828 CSDC2Q9Y534 153 aaKnown RBP4.52□□□□□ -1.69
CASC19-260ENST00000641828 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 HLA-DMBP28068 263 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 RPL13AP40429 203 aaKnown RBP4.51□□□□□ -1.69
CASC19-260ENST00000641828 MAGEA5P43359 124 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 ATP5J2P56134 94 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 LYZP61626 148 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 PDE6HQ13956 83 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 CRYBG3Q68DQ2 2970 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 SFTA2Q6UW10 78 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 C15orf53Q8NAA6 179 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 MRPL20Q9BYC9 149 aaKnown RBP4.51□□□□□ -1.69
CASC19-260ENST00000641828 RPUSD1Q9UJJ7 312 aaKnown RBP4.51□□□□□ -1.69
CASC19-260ENST00000641828 BOD1L1Q8NFC6 3051 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 IGHV3OR15-7A0A075B7D8 119 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 ZNF815PA8K554 130 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 C9JAW5 83 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 DUSP14O95147 198 aaKnown RBP4.51□□□□□ -1.69
CASC19-260ENST00000641828 LHBP01229 141 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 Q6ZQT7 251 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 ODF3Q96PU9 254 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 SHANK2-AS3Q9BTD1 123 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 ONECUT1Q9UBC0 465 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 PRO1854Q9UHT4 67 aa4.51□□□□□ -1.69
CASC19-260ENST00000641828 RP1L1Q8IWN7 2480 aaPredicted RBP4.51□□□□□ -1.69
CASC19-260ENST00000641828 TRAV2A0A0B4J234 112 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 IGKV3-15P01624 115 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 CFC1BP0CG36 223 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 CFC1P0CG37 223 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 Q0VFX4 171 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 HES1Q14469 280 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 C10orf55Q5SWW7 151 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 RUSC1-AS1Q66K80 236 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 SPINK14Q6IE38 97 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 GUSBP11Q6P575 273 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 FAM57AQ8TBR7 257 aa4.5□□□□□ -1.69
CASC19-260ENST00000641828 C17orf77Q96MU5 243 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms