RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MED14OSP0DP75 135 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 S100A4P26447 101 aaKnown RBP9.6□□□□□ -0.87
PHGDH-221ENST00000641573 RBMY1FQ15415 496 aaKnown RBP9.6□□□□□ -0.87
PHGDH-221ENST00000641573 TWIST1Q15672 202 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
PHGDH-221ENST00000641573 INSP01308 110 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 S100A6P06703 90 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 NTF3P20783 257 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 NDUFA6P56556 154 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 CACNG7P62955 275 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 SLAQ13239 276 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 KIAA1644Q3SXP7 199 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 DEFB121Q5J5C9 76 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 GTSCR1Q86UQ5 136 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 OR10AG1Q8NH19 301 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 AGRNO00468 2067 aa9.59□□□□□ -0.87
PHGDH-221ENST00000641573 SORL1Q92673 2214 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 RPL35AP18077 110 aaKnown RBP9.58□□□□□ -0.88
PHGDH-221ENST00000641573 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
PHGDH-221ENST00000641573 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 DEFB125Q8N687 156 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 C20orf144Q9BQM9 153 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 MSRB1Q9NZV6 116 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
PHGDH-221ENST00000641573 IGHV4-4A0A075B6R2 117 aa9.57□□□□□ -0.88
PHGDH-221ENST00000641573 IGHV3-16A0A0C4DH30 117 aa9.57□□□□□ -0.88
PHGDH-221ENST00000641573 RNASE3P12724 160 aaKnown RBP9.57□□□□□ -0.88
PHGDH-221ENST00000641573 SNRPEP62304 92 aaKnown RBP9.57□□□□□ -0.88
PHGDH-221ENST00000641573 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
PHGDH-221ENST00000641573 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 LOC105371267A0A1B0GV96 52 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 CBY3A6NI87 242 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 SPRY2O43597 315 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 Q8N1Y9 231 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 LINC01587Q99440 93 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 LINC00467Q9BRT7 94 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 TMEM191AQ9H0A3 160 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 MDFICQ9P1T7 246 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 PHLDA3Q9Y5J5 127 aa9.56□□□□□ -0.88
PHGDH-221ENST00000641573 LOC102724200A0A096LPH7 203 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-221ENST00000641573 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
PHGDH-221ENST00000641573 K7EIL1 84 aa9.55□□□□□ -0.88
PHGDH-221ENST00000641573 SRIP30626 198 aa9.55□□□□□ -0.88
PHGDH-221ENST00000641573 FAM104BQ5XKR9 115 aa9.55□□□□□ -0.88
PHGDH-221ENST00000641573 MORN3Q6PF18 240 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-221ENST00000641573 C9orf85Q96MD7 179 aa9.55□□□□□ -0.88
PHGDH-221ENST00000641573 M0R381 172 aa9.54□□□□□ -0.88
PHGDH-221ENST00000641573 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-221ENST00000641573 HTN1P15515 57 aa9.54□□□□□ -0.88
PHGDH-221ENST00000641573 SMIM15Q7Z3B0 74 aa9.54□□□□□ -0.88
PHGDH-221ENST00000641573 AMN1Q8IY45 258 aa9.54□□□□□ -0.88
PHGDH-221ENST00000641573 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
PHGDH-221ENST00000641573 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-221ENST00000641573 NXPH4O95158 308 aa9.53□□□□□ -0.88
PHGDH-221ENST00000641573 HOXA5P20719 270 aa9.53□□□□□ -0.88
PHGDH-221ENST00000641573 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
PHGDH-221ENST00000641573 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
PHGDH-221ENST00000641573 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
PHGDH-221ENST00000641573 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
PHGDH-221ENST00000641573 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
PHGDH-221ENST00000641573 IGHV3OR16-12A0A075B7B8 117 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 PRM2P04554 102 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 EVI2AP22794 236 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 Q0VG73 95 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.89
PHGDH-221ENST00000641573 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 BIRC6Q9NR09 4857 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 GOLT1BQ9Y3E0 138 aa9.52□□□□□ -0.89
PHGDH-221ENST00000641573 UBE2CO00762 179 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 RAB4AP20338 218 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 ZNF415Q09FC8 603 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 OR10J3Q5JRS4 329 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 BAGE3Q86Y29 109 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 SYT8Q8NBV8 401 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 B9D2Q9BPU9 175 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 U3KQK5 164 aa9.51□□□□□ -0.89
PHGDH-221ENST00000641573 C3orf84H3BNL1 204 aa9.5□□□□□ -0.89
PHGDH-221ENST00000641573 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
PHGDH-221ENST00000641573 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
PHGDH-221ENST00000641573 AP1S3Q96PC3 154 aa9.5□□□□□ -0.89
PHGDH-221ENST00000641573 D6R8Y8 96 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 SMKR1H3BMG3 65 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 AZU1P20160 251 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 CKS2P33552 79 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 HIST3H2BBQ8N257 126 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-221ENST00000641573 C11orf72Q8NBR9 251 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 CSNK1G2-AS1Q8NCQ2 148 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 RCHY1Q96PM5 261 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 DPH3P1Q9H4G8 78 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 GSN-AS1Q9NRJ2 163 aa9.49□□□□□ -0.89
PHGDH-221ENST00000641573 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
PHGDH-221ENST00000641573 EGFEM1PQ0D2K5 195 aa9.48□□□□□ -0.89
PHGDH-221ENST00000641573 PDZD11Q5EBL8 140 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms