RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CACNG7P62955 275 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 M0R381 172 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 GZMBP10144 247 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 SSTP61278 116 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 Q8NAQ8 132 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
PHGDH-218ENST00000641491 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 PRM2P04554 102 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 S100A8P05109 93 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 S100A1P23297 94 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
PHGDH-218ENST00000641491 RIGQ13278 110 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 FAM222AQ5U5X8 452 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 PGLYRP4Q96LB8 373 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
PHGDH-218ENST00000641491 V9GYV3 84 aa9.33□□□□□ -0.92
PHGDH-218ENST00000641491 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 GAGE7O76087 117 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 OR5AL1P0C617 328 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 TWIST1Q15672 202 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 DNLZQ5SXM8 178 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 BTF3L4Q96K17 158 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 NDUFAF3Q9BU61 184 aa9.32□□□□□ -0.92
PHGDH-218ENST00000641491 TENM3Q9P273 2699 aa9.31□□□□□ -0.92
PHGDH-218ENST00000641491 A0A087WWC5 75 aa9.31□□□□□ -0.92
PHGDH-218ENST00000641491 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
PHGDH-218ENST00000641491 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
PHGDH-218ENST00000641491 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
PHGDH-218ENST00000641491 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 A0A1B0GUT8 65 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 A8MWV9 139 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 SNAI2O43623 268 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 SPINK4O60575 86 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 RNASE3P12724 160 aaKnown RBP9.3□□□□□ -0.92
PHGDH-218ENST00000641491 IMMP2LQ96T52 175 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 DKK2Q9UBU2 259 aa9.3□□□□□ -0.92
PHGDH-218ENST00000641491 A0A1B0GW15 77 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 SMIM27A0A1W2PRY6 76 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 RHODO00212 210 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 ATP6V1G1O75348 118 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 IGLC6P0CF74 106 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 HTN3P15516 51 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 CTRLP40313 264 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 OR10AG1Q8NH19 301 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
PHGDH-218ENST00000641491 TRGV4A0A0C4DH28 118 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 CIDEAO60543 219 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 ATP5G1P05496 136 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 RAB4BP61018 213 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 PIK3CD-AS1Q5SR53 167 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 WDR73Q6P4I2 378 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 Q6ZTI0 123 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 PTH2Q96A98 100 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
PHGDH-218ENST00000641491 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 TRAV4A0A0B4J268 109 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 F5H697 171 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 IGHV3-53P01767 116 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 MGPP08493 103 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 HBBP68871 147 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 ZNF56Q15929 161 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
PHGDH-218ENST00000641491 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 GTSF1Q8WW33 167 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 RASL10AQ92737 203 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-218ENST00000641491 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 SMCO4Q9NRQ5 59 aa9.27□□□□□ -0.93
PHGDH-218ENST00000641491 NTF3P20783 257 aa9.26□□□□□ -0.93
PHGDH-218ENST00000641491 CAMPP49913 170 aa9.26□□□□□ -0.93
PHGDH-218ENST00000641491 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-218ENST00000641491 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
PHGDH-218ENST00000641491 SLAQ13239 276 aa9.26□□□□□ -0.93
PHGDH-218ENST00000641491 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
PHGDH-218ENST00000641491 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
PHGDH-218ENST00000641491 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
PHGDH-218ENST00000641491 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
PHGDH-218ENST00000641491 F5H768 121 aa9.25□□□□□ -0.93
PHGDH-218ENST00000641491 FOXA3P55318 350 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms