RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 SNCGO76070 127 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 IGLC6P0CF74 106 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 BPESC1Q9GZL8 116 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 C2orf91Q6ZV80 131 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 RAX2Q96IS3 184 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 APCP25054 2843 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 MED14OSP0DP75 135 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 TRAV26-2A0A0B4J265 109 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 K7ERJ3 54 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 PGPEP1Q9NXJ5 209 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 SETXQ7Z333 2677 aaKnown RBP4.31□□□□□ -1.72
SCN3A-210ENST00000640652 H7C2G1 150 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 Q6ZVH6 145 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 USP24Q9UPU5 2620 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 PRB4P10163 310 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-210ENST00000640652 HTN1P15515 57 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 C16orf54Q6UWD8 224 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 RHOHQ15669 191 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 IGFL4Q6B9Z1 124 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 FOXI2Q6ZQN5 318 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 C5orf56Q8N8D9 126 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 CFHR4Q92496 578 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 AGPAT4-IT1Q9H0P7 198 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 TP53TG1Q9Y2A0 90 aa4.31□□□□□ -1.72
SCN3A-210ENST00000640652 ATRQ13535 2644 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 A8MWV9 139 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 RBX1P62877 108 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 NEGR1Q7Z3B1 354 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 PIFOQ8TCI5 191 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 PLEKHB2Q96CS7 222 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
SCN3A-210ENST00000640652 YAE1D1Q9NRH1 226 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 IGHV1-69DA0A0B4J2H0 117 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 IGHV1-69P01742 117 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 IGHV3-11P01762 117 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 RHPN1-AS1Q9BWJ2 59 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 ASPMQ8IZT6 3477 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 EBI3Q14213 229 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 TRPT1Q86TN4 253 aaKnown RBP4.3□□□□□ -1.72
SCN3A-210ENST00000640652 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
SCN3A-210ENST00000640652 IGHV7-4-1A0A0J9YVY3 117 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 G3V318 75 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 CD300EQ496F6 205 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-210ENST00000640652 NF1P21359 2839 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 JMJD8Q96S16 334 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 TM2D2Q9BX73 214 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-210ENST00000640652 CFAP47Q6ZTR5 3102 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 PRSS2P07478 247 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 Q8N9W7 124 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 DUX5Q96PT3 197 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 C1QTNF4Q9BXJ3 329 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 PEMTQ9UBM1 199 aa4.3□□□□□ -1.72
SCN3A-210ENST00000640652 B4DSR2 109 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 H3BUX3 64 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 I3L3M4 83 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 RRN3P1Q2M238 152 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 SDHAF1A6NFY7 115 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 G3V4G9 280 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 HLA-DMBP28068 263 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 TCF15Q12870 199 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 FOXE3Q13461 319 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 DCHS2Q6V1P9 2916 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 CRIP1P50238 77 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 DUX3Q96PT4 197 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 CD28P10747 220 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 ATXN8Q156A1 80 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 RNF152Q8N8N0 203 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 ATP6V0E2Q8NHE4 81 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 GAGE12HA6NDE8 117 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 CCDC140Q96MF4 163 aa4.29□□□□□ -1.72
SCN3A-210ENST00000640652 VWC2LB2RUY7 222 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 FGF6P10767 208 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 GTSF1LQ9H1H1 148 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 ZFAND3Q9H8U3 227 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
SCN3A-210ENST00000640652 FCN3O75636 299 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 FXYD2P54710 66 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 C12orf74Q32Q52 190 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 CENPVL3A0A0U1RRI6 287 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 UBE2L6O14933 153 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 GRNP28799 593 aaKnown RBP4.28□□□□□ -1.72
SCN3A-210ENST00000640652 Q8N6K4 173 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 TRAV12-3A0A0B4J271 114 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 H3BMG7 143 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 ZFAND6Q6FIF0 208 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 PRADC1Q9BSG0 188 aa4.28□□□□□ -1.72
SCN3A-210ENST00000640652 CRYBG3Q68DQ2 2970 aa4.28□□□□□ -1.73
SCN3A-210ENST00000640652 M0R2P5 195 aa4.28□□□□□ -1.73
SCN3A-210ENST00000640652 ERG28Q9UKR5 140 aa4.28□□□□□ -1.73
SCN3A-210ENST00000640652 OVOL3O00110 214 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms