RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 IL15RAQ13261 267 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 LENEPQ9Y5L5 61 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 IGHV3-38A0A0C4DH36 116 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 H3BT86 120 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 COL4A5P29400 1685 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 COX7B2Q8TF08 81 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 A4D1N5 150 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 UQCRQO14949 82 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 CLPSP04118 112 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 NREPQ16612 68 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 HIGD2BQ4VC39 106 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 Q6ZUT4 128 aa13.13□□□□□ -0.31
KCNMA1-261ENST00000639486 FAM120AOSQ5T036 256 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 FOXL2NBQ6ZUU3 175 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 GATA4P43694 442 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 APOC4P55056 127 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 GATA3P23771 443 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 XCL1P47992 114 aa13.12□□□□□ -0.31
KCNMA1-261ENST00000639486 FXYD2P54710 66 aa13.11□□□□□ -0.31
KCNMA1-261ENST00000639486 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
KCNMA1-261ENST00000639486 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
KCNMA1-261ENST00000639486 SND1-IT1Q9HBX3 110 aa13.11□□□□□ -0.31
KCNMA1-261ENST00000639486 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
KCNMA1-261ENST00000639486 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
KCNMA1-261ENST00000639486 NDUFB1O75438 58 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 SEC61GP60059 68 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 CSRP2Q16527 193 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 ASPHD1Q5U4P2 390 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 C22orf46C9J442 243 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
KCNMA1-261ENST00000639486 UBE2E1P51965 193 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 LINC01620Q4KN68 170 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 PDE6GP18545 87 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 LYPD2Q6UXB3 125 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 WT1-ASQ06250 92 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 ZFP36L1Q07352 338 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 LINC01356Q8N9X3 169 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 LINC01619G3V211 115 aa13.09□□□□□ -0.31
KCNMA1-261ENST00000639486 RNF152Q8N8N0 203 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 A0A0G2JNJ9 132 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 IGKV1-39P01597 117 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 IGKV1D-39P04432 117 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 CLPSL2Q6UWE3 100 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 Q9UFV3 132 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 SPTSSBQ8NFR3 76 aa13.08□□□□□ -0.32
KCNMA1-261ENST00000639486 PRB2P02812 416 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-261ENST00000639486 ATP5EP56381 51 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-261ENST00000639486 LINC00643Q86TS7 51 aa13.07□□□□□ -0.32
KCNMA1-261ENST00000639486 U3KQE9 123 aa13.07□□□□□ -0.32
KCNMA1-261ENST00000639486 C17orf58Q2M2W7 97 aa13.06□□□□□ -0.32
KCNMA1-261ENST00000639486 LINC00311Q8N616 119 aa13.06□□□□□ -0.32
KCNMA1-261ENST00000639486 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
KCNMA1-261ENST00000639486 Q8TCH9 128 aa13.06□□□□□ -0.32
KCNMA1-261ENST00000639486 FHL1Q13642 323 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 IGKV2-29A2NJV5 120 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 CXCL5P42830 114 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 UBE2BP63146 152 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 ANKRD39Q53RE8 183 aa13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 MBD3L4A6NDZ8 208 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 MBD3L3A6NE82 208 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 MBD3L5A6NJ08 208 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 MBD3L2Q8NHZ7 208 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-261ENST00000639486 E9PLD3 99 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 TOMM6Q96B49 74 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 FAM240AA0A1B0GVK7 77 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 BUB3O43684 328 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 RPL39LQ96EH5 51 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 B3GALT5-AS1P59052 145 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 RNF183Q96D59 192 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 IGHV7-4-1A0A0J9YVY3 117 aa13.04□□□□□ -0.32
KCNMA1-261ENST00000639486 ETV2O00321 342 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-261ENST00000639486 PIFOQ8TCI5 191 aa13.03□□□□□ -0.32
KCNMA1-261ENST00000639486 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-261ENST00000639486 ETDCA0A1B0GVM5 59 aa13.03□□□□□ -0.32
KCNMA1-261ENST00000639486 C15orf65H3BRN8 121 aa13.03□□□□□ -0.32
KCNMA1-261ENST00000639486 FOXE3Q13461 319 aa13.03□□□□□ -0.32
KCNMA1-261ENST00000639486 PRR20EP86478 221 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 PRR20CP86479 221 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 PRR20DP86480 221 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 PRR20BP86481 221 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 PRR20AP86496 221 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 HIST2H2BCQ6DN03 193 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 C3orf22Q8N5N4 141 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 CGB3P0DN86 165 aa13.02□□□□□ -0.32
KCNMA1-261ENST00000639486 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms