RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 STARD9Q9P2P6 4700 aa13.73□□□□□ -0.21
HLA-A-209ENST00000638375 GATCO43716 136 aaKnown RBP13.73□□□□□ -0.21
HLA-A-209ENST00000638375 MED14OSP0DP75 135 aa13.73□□□□□ -0.21
HLA-A-209ENST00000638375 ZFAND6Q6FIF0 208 aa13.73□□□□□ -0.21
HLA-A-209ENST00000638375 PTH2Q96A98 100 aa13.73□□□□□ -0.21
HLA-A-209ENST00000638375 C18orf15Q96N68 181 aa13.73□□□□□ -0.21
HLA-A-209ENST00000638375 OSTCQ9NRP0 149 aa13.73□□□□□ -0.21
HLA-A-209ENST00000638375 MUC4Q99102 2169 aa13.72□□□□□ -0.21
HLA-A-209ENST00000638375 TRGV2A0A075B6R0 118 aa13.72□□□□□ -0.21
HLA-A-209ENST00000638375 TRAV10A0A0B4J240 114 aa13.72□□□□□ -0.21
HLA-A-209ENST00000638375 SNAI2O43623 268 aa13.72□□□□□ -0.21
HLA-A-209ENST00000638375 IGLC6P0CF74 106 aa13.72□□□□□ -0.21
HLA-A-209ENST00000638375 SSBP4Q9BWG4 385 aaPredicted RBP13.72□□□□□ -0.21
HLA-A-209ENST00000638375 HTN3P15516 51 aa13.71□□□□□ -0.21
HLA-A-209ENST00000638375 ZNF876PQ49A33 203 aa13.71□□□□□ -0.21
HLA-A-209ENST00000638375 SFRP2Q96HF1 295 aa13.71□□□□□ -0.21
HLA-A-209ENST00000638375 DEFB131BA0A096LNP1 70 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 F8W036 122 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 ATP5G1P05496 136 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 OR5AL1P0C617 328 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 CT83Q5H943 113 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 POM121L12Q8N7R1 296 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 OR10AG1Q8NH19 301 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 PHLDA3Q9Y5J5 127 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 V9GYV3 84 aa13.7□□□□□ -0.22
HLA-A-209ENST00000638375 DYNC2H1Q8NCM8 4307 aaKnown RBP13.7□□□□□ -0.22
HLA-A-209ENST00000638375 IGHV3-53P01767 116 aa13.69□□□□□ -0.22
HLA-A-209ENST00000638375 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
HLA-A-209ENST00000638375 CEMP1Q6PRD7 247 aaPredicted RBP13.69□□□□□ -0.22
HLA-A-209ENST00000638375 C15orf54Q8N8G6 183 aa13.69□□□□□ -0.22
HLA-A-209ENST00000638375 FER1L6-AS1Q8NA97 138 aa13.69□□□□□ -0.22
HLA-A-209ENST00000638375 OR10G8Q8NGN5 311 aa13.69□□□□□ -0.22
HLA-A-209ENST00000638375 MUC21A0A0G2JKD1 596 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 MUC21A0A140T8X8 626 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 C3orf84H3BNL1 204 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 HOXA5P20719 270 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
HLA-A-209ENST00000638375 GTSF1Q8WW33 167 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 NDUFAF3Q9BU61 184 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 SEC11CQ9BY50 192 aa13.68□□□□□ -0.22
HLA-A-209ENST00000638375 CSMD3Q7Z407 3707 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 TRAV4A0A0B4J268 109 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 NUPR2A6NF83 97 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 A8MWL6 223 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 M0R381 172 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 NXPH4O95158 308 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 ZFP82Q8N141 532 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 SYT8Q8NBV8 401 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 ZNF479Q96JC4 524 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 TPPP3Q9BW30 176 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 JPT2Q9H910 190 aa13.67□□□□□ -0.22
HLA-A-209ENST00000638375 A0A1W2PPQ1 181 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 F5H768 121 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 RS1O15537 224 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 CTRLP40313 264 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 CASC10Q5T4H9 136 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 CFAP126Q5VTH2 177 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 LYZL1Q6UWQ5 148 aa13.66□□□□□ -0.22
HLA-A-209ENST00000638375 C10orf91Q5T1B1 145 aa13.65□□□□□ -0.22
HLA-A-209ENST00000638375 OR4C5Q8NGB2 326 aa13.65□□□□□ -0.22
HLA-A-209ENST00000638375 TSKUQ8WUA8 353 aa13.65□□□□□ -0.22
HLA-A-209ENST00000638375 SSTP61278 116 aa13.64□□□□□ -0.23
HLA-A-209ENST00000638375 FHL2Q14192 279 aa13.64□□□□□ -0.23
HLA-A-209ENST00000638375 SPANXN1Q5VSR9 72 aa13.64□□□□□ -0.23
HLA-A-209ENST00000638375 PLECQ15149 4684 aaKnown RBP13.63□□□□□ -0.23
HLA-A-209ENST00000638375 A8MWV9 139 aa13.63□□□□□ -0.23
HLA-A-209ENST00000638375 F2Z2F3 143 aa13.63□□□□□ -0.23
HLA-A-209ENST00000638375 FOXA3P55318 350 aaPredicted RBP13.63□□□□□ -0.23
HLA-A-209ENST00000638375 RNF212Q495C1 297 aa13.63□□□□□ -0.23
HLA-A-209ENST00000638375 SLC7A5P1Q8MH63 180 aa13.63□□□□□ -0.23
HLA-A-209ENST00000638375 SAMD10Q9BYL1 202 aa13.63□□□□□ -0.23
HLA-A-209ENST00000638375 GFRA4Q9GZZ7 299 aa13.63□□□□□ -0.23
HLA-A-209ENST00000638375 CARHSP1Q9Y2V2 147 aaKnown RBP13.63□□□□□ -0.23
HLA-A-209ENST00000638375 IGHV4-4A0A075B6R2 117 aa13.62□□□□□ -0.23
HLA-A-209ENST00000638375 IGLL5B9A064 214 aa13.62□□□□□ -0.23
HLA-A-209ENST00000638375 CACNG7P62955 275 aa13.62□□□□□ -0.23
HLA-A-209ENST00000638375 TMEM88Q6PEY1 159 aa13.62□□□□□ -0.23
HLA-A-209ENST00000638375 PGLYRP4Q96LB8 373 aa13.62□□□□□ -0.23
HLA-A-209ENST00000638375 CNFNQ9BYD5 112 aa13.62□□□□□ -0.23
HLA-A-209ENST00000638375 KLK5Q9Y337 293 aaPredicted RBP13.62□□□□□ -0.23
HLA-A-209ENST00000638375 NACAE9PAV3 2078 aa13.61□□□□□ -0.23
HLA-A-209ENST00000638375 IGHV3-73A0A0B4J1V6 119 aa13.61□□□□□ -0.23
HLA-A-209ENST00000638375 FAM231BA6NCW3 169 aa13.61□□□□□ -0.23
HLA-A-209ENST00000638375 HIGD1CA8MV81 97 aa13.61□□□□□ -0.23
HLA-A-209ENST00000638375 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
HLA-A-209ENST00000638375 MSRB1Q9NZV6 116 aa13.61□□□□□ -0.23
HLA-A-209ENST00000638375 CRYGDP07320 174 aa13.6□□□□□ -0.23
HLA-A-209ENST00000638375 WDR73Q6P4I2 378 aa13.6□□□□□ -0.23
HLA-A-209ENST00000638375 TRAV26-1A0A087WT03 109 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 A0A087WWL8 130 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 TRGV4A0A0C4DH28 118 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 SMIM27A0A1W2PRY6 76 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 PPP1R2P9O14990 202 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 NTF3P20783 257 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 NUP35Q8NFH5 326 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 ANAPC16Q96DE5 110 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 VSIG2Q96IQ7 327 aa13.59□□□□□ -0.23
HLA-A-209ENST00000638375 FAM210BQ96KR6 192 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms