RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 SAA1P0DJI8 122 aaPredicted RBP-2.44□□□□□ -2.8
SCN1A-215ENST00000637285 TPT1P13693 172 aaKnown RBP-2.44□□□□□ -2.8
SCN1A-215ENST00000637285 TAF1AQ15573 450 aaPredicted RBP-2.44□□□□□ -2.8
SCN1A-215ENST00000637285 GPX7Q96SL4 187 aaPredicted RBP-2.44□□□□□ -2.8
SCN1A-215ENST00000637285 PBDC1Q9BVG4 233 aa-2.44□□□□□ -2.8
SCN1A-215ENST00000637285 PIK3C2AO00443 1686 aa-2.44□□□□□ -2.8
SCN1A-215ENST00000637285 NIPBLQ6KC79 2804 aaeCLIP-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 LAMA1P25391 3075 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 LRP5O75197 1615 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 I3L2K1 104 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 IFNA21P01568 189 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 OR10X1Q8NGY0 326 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 NEK7Q8TDX7 302 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 COX7B2Q8TF08 81 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 AKAP11Q9UKA4 1901 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 FAT3Q8TDW7 4589 aa-2.45□□□□□ -2.8
SCN1A-215ENST00000637285 KPNA4O00629 521 aaPredicted RBP-2.46□□□□□ -2.8
SCN1A-215ENST00000637285 DEFB112Q30KQ8 113 aa-2.46□□□□□ -2.8
SCN1A-215ENST00000637285 SCN3BQ9NY72 215 aa-2.46□□□□□ -2.8
SCN1A-215ENST00000637285 ARAP1Q96P48 1450 aa-2.46□□□□□ -2.8
SCN1A-215ENST00000637285 PKD1P98161 4303 aa-2.46□□□□□ -2.8
SCN1A-215ENST00000637285 CD109Q6YHK3 1445 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 TRAV1-2A0A0B4J238 106 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 A0A1B0GW64 132 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 LOC107986453A0A1B0GWG9 222 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 OGNP20774 298 aaKnown RBP-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 S100A3P33764 101 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 MAXP61244 160 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 PIGYQ3MUY2 71 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 OR2T2Q6IF00 324 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 DGCR14Q96DF8 476 aaKnown RBP-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 VPS25Q9BRG1 176 aa-2.47□□□□□ -2.8
SCN1A-215ENST00000637285 CAMSAP2Q08AD1 1489 aa-2.47□□□□□ -2.81
SCN1A-215ENST00000637285 CXorf51AA0A1B0GTR3 108 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 HSBP1L1C9JCN9 74 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 IFNA6P05013 189 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 ADCYAP1P18509 176 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 C20orf197Q8N268 126 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 OR8J2Q8NGG1 315 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 OR5H6Q8NGV6 325 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 SDF2Q99470 211 aa-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 PRRC2CQ9Y520 2896 aaKnown RBP-2.48□□□□□ -2.81
SCN1A-215ENST00000637285 CASZ1Q86V15 1759 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 ZNF609O15014 1411 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 NCALDP61601 193 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 OR8B8Q15620 311 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 C3orf33Q6P1S2 294 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 AP3S1Q92572 193 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 NPVFQ9HCQ7 196 aa-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 SIPA1L3O60292 1781 aaPredicted RBP-2.49□□□□□ -2.81
SCN1A-215ENST00000637285 PTPRGP23470 1445 aa-2.5□□□□□ -2.81
SCN1A-215ENST00000637285 TMEM97Q5BJF2 176 aa-2.5□□□□□ -2.81
SCN1A-215ENST00000637285 LINC00472Q9H8W2 130 aa-2.5□□□□□ -2.81
SCN1A-215ENST00000637285 ERCC6L2Q5T890 1561 aa-2.5□□□□□ -2.81
SCN1A-215ENST00000637285 CCDC144AA2RUR9 1427 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 ZMYM4Q5VZL5 1548 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 DLC1Q96QB1 1528 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 NDUFC2O95298 119 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 SLC25A4P12235 298 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 SCGB2B2Q4G0G5 96 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 DEFB105AQ8NG35 78 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 PPDPFLQ8WWR9 84 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 PRELID3AQ96N28 172 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 SIGMAR1Q99720 223 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 TANC2Q9HCD6 1990 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 UHRF1BP1Q6BDS2 1440 aa-2.51□□□□□ -2.81
SCN1A-215ENST00000637285 DNAH2Q9P225 4427 aa-2.52□□□□□ -2.81
SCN1A-215ENST00000637285 IFI27L1Q96BM0 104 aa-2.52□□□□□ -2.81
SCN1A-215ENST00000637285 LRP6O75581 1613 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 AKAP9Q99996 3911 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 NBASA2RRP1 2371 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 IGHV1-24A0A0C4DH33 117 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 RIIAD1A6NNX1 92 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 MT1AP04731 61 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 FABP2P12104 132 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 NPC2P61916 151 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 BLCAPP62952 87 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 BRK1Q8WUW1 75 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 PAIP2Q9BPZ3 127 aaKnown RBP-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 LXNQ9BS40 222 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 IL20Q9NYY1 176 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 PYCARDQ9ULZ3 195 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 FAM32AQ9Y421 112 aaKnown RBP-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 MAP3K5Q99683 1374 aa-2.53□□□□□ -2.81
SCN1A-215ENST00000637285 USP9XQ93008 2570 aaPredicted RBP-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 WNK3Q9BYP7 1800 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 AIPO00170 330 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 APOA2P02652 100 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 CKS2P33552 79 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 RTL8BQ17RB0 113 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 CFAP126Q5VTH2 177 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 BTF3L4Q96K17 158 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 RTL8AQ9BWD3 113 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 NMNAT1Q9HAN9 279 aaPredicted RBP-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 ZNF142P52746 1687 aaPredicted RBP-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 CUBNO60494 3623 aa-2.54□□□□□ -2.82
SCN1A-215ENST00000637285 H3BQV1 296 aa-2.55□□□□□ -2.82
SCN1A-215ENST00000637285 PTMSP20962 102 aa-2.55□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms