RNA–Protein interactions for RNA: ENST00000637110.1

CLN3-257, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-257ENST00000637110 PAGE4O60829 102 aa7.99□□□□□ -1.13
CLN3-257ENST00000637110 INAFM2P0DMQ5 153 aa7.99□□□□□ -1.13
CLN3-257ENST00000637110 AKR1C3P42330 323 aa7.99□□□□□ -1.13
CLN3-257ENST00000637110 TNP2Q05952 138 aa7.99□□□□□ -1.13
CLN3-257ENST00000637110 TMUB2Q71RG4 321 aa7.99□□□□□ -1.13
CLN3-257ENST00000637110 TXNDC17Q9BRA2 123 aa7.99□□□□□ -1.13
CLN3-257ENST00000637110 A0A1W2PPQ1 181 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 B4DEV8 164 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 M0R036 132 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 TPT1P13693 172 aaKnown RBP7.98□□□□□ -1.13
CLN3-257ENST00000637110 ASIPP42127 132 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
CLN3-257ENST00000637110 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 PRADC1Q9BSG0 188 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
CLN3-257ENST00000637110 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 PGPEP1LA6NFU8 196 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 RS1O15537 224 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 ZNF506Q5JVG8 444 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 DPPA3Q6W0C5 159 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 MBD3L1Q8WWY6 194 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 ZC2HC1AQ96GY0 325 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 TCEAL7Q9BRU2 100 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 KRTAP1-5Q9BYS1 174 aa7.97□□□□□ -1.13
CLN3-257ENST00000637110 TRAV9-2A0A087WT02 112 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 TMSB15BA0A087X1C1 80 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 GRIFINA4D1Z8 144 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 CIDEAO60543 219 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 SH2D1AO60880 128 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
CLN3-257ENST00000637110 GATA1P15976 413 aaPredicted RBP7.96□□□□□ -1.14
CLN3-257ENST00000637110 FAM162BQ5T6X4 162 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 SH2D6Q7Z4S9 175 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 LY96Q9Y6Y9 160 aa7.96□□□□□ -1.14
CLN3-257ENST00000637110 H3BVH4 76 aa7.95□□□□□ -1.14
CLN3-257ENST00000637110 LINC00315P59091 139 aa7.95□□□□□ -1.14
CLN3-257ENST00000637110 RHOHQ15669 191 aa7.95□□□□□ -1.14
CLN3-257ENST00000637110 EIF5AL1Q6IS14 154 aaKnown RBP7.95□□□□□ -1.14
CLN3-257ENST00000637110 SLC25A29Q8N8R3 303 aa7.95□□□□□ -1.14
CLN3-257ENST00000637110 SYT8Q8NBV8 401 aa7.95□□□□□ -1.14
CLN3-257ENST00000637110 UBR4Q5T4S7 5183 aa7.95□□□□□ -1.14
CLN3-257ENST00000637110 A8MWV9 139 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 TEX46H3BTG2 121 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 S100A9P06702 114 aaKnown RBP7.94□□□□□ -1.14
CLN3-257ENST00000637110 ARMS2P0C7Q2 107 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 EVI2AP22794 236 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 CRIP1P50238 77 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 WFDC10BQ8IUB3 73 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 PTH2Q96A98 100 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 GNG13Q9P2W3 67 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
CLN3-257ENST00000637110 hCG_2014768A0A024R1R8 64 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 TRBV6-1A0A0K0K1D8 114 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 SCO2A0A1W2PP80 73 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 KRBOX1C9JBD0 128 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 LTAP01374 205 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
CLN3-257ENST00000637110 BTF3P20290 206 aaKnown RBP7.93□□□□□ -1.14
CLN3-257ENST00000637110 SPATA12Q7Z6I5 190 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 BAGE2Q86Y30 109 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 PARLQ9H300 379 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 IL36BQ9NZH7 164 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
CLN3-257ENST00000637110 TRAV8-6A0A0B4J262 113 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 M0R381 172 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 RAB5CP51148 216 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 ZNF674Q2M3X9 581 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 OR10J3Q5JRS4 329 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 FAM74A4Q5TZK3 123 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 DMRTA1Q5VZB9 504 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 TCTE3Q8IZS6 198 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 TNFRSF18Q9Y5U5 241 aa7.92□□□□□ -1.14
CLN3-257ENST00000637110 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
CLN3-257ENST00000637110 GAGE12JA6NER3 117 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 EREGO14944 169 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 GAGE1Q13065 139 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 GAGE4Q13068 117 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 GAGE5Q13069 117 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 GAGE13Q4V321 117 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 PRR27Q6MZM9 219 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 COX8CQ7Z4L0 72 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 NFE4Q86UQ8 179 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 ATP6V0E2Q8NHE4 81 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 JPT2Q9H910 190 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 MANBALQ9NQG1 85 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
CLN3-257ENST00000637110 CRYGDP07320 174 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 CCL20P78556 96 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 ZFP2Q6ZN57 461 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 Q6ZNX1 250 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 Q6ZSN1 163 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 AKAP14Q86UN6 197 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 ZFP82Q8N141 532 aa7.9□□□□□ -1.14
CLN3-257ENST00000637110 SAMD10Q9BYL1 202 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms