RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 TP53TG3Q9ULZ0 132 aa7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 A0A1B0GW15 77 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 F2Z2F3 143 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 SPRY2O43597 315 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 HOXA5P20719 270 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 NTF3P20783 257 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 BEAN1Q3B7T3 259 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 COA6Q5JTJ3 125 aaKnown RBP7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 TIMM8BQ9Y5J9 83 aaPredicted RBP7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 TENM1Q9UKZ4 2725 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 S100A8P05109 93 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 OR5AL1P0C617 328 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 ASIPP42127 132 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 TWIST1Q15672 202 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 FAM159AQ6UWV7 190 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 ZNF493Q6ZR52 646 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 C19orf73Q9NVV2 129 aa7.35□□□□□ -1.23
CACNA1A-216ENST00000635742 LOC102724200A0A096LPH7 203 aaPredicted RBP7.34□□□□□ -1.23
CACNA1A-216ENST00000635742 LINC00310P59036 64 aa7.34□□□□□ -1.23
CACNA1A-216ENST00000635742 TRPT1Q86TN4 253 aaKnown RBP7.34□□□□□ -1.23
CACNA1A-216ENST00000635742 HIST3H2BBQ8N257 126 aa7.34□□□□□ -1.23
CACNA1A-216ENST00000635742 TNFRSF18Q9Y5U5 241 aa7.34□□□□□ -1.23
CACNA1A-216ENST00000635742 ATRQ13535 2644 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 NUPR1O60356 82 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 S100A4P26447 101 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 GAGE1Q13065 139 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 TDRG1Q3Y452 100 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 DNLZQ5SXM8 178 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 STHQ8IWL8 128 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 AMN1Q8IY45 258 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 TMEM256Q8N2U0 113 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 NIPBLQ6KC79 2804 aaeCLIP7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 IGHV1OR15-1A0A075B7D0 117 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 C9orf66Q5T8R8 295 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 C18orf32Q8TCD1 76 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 RNASE8Q8TDE3 154 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 KCNS1Q96KK3 526 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 SCRT2Q9NQ03 307 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 GOLT1BQ9Y3E0 138 aa7.33□□□□□ -1.24
CACNA1A-216ENST00000635742 IGHV4-4A0A075B6R2 117 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 CACNG7P62955 275 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 Q0VG73 95 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 SPANXN1Q5VSR9 72 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 Q8N1Y9 231 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 RCHY1Q96PM5 261 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 FAM110AQ9BQ89 295 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 ZNF747Q9BV97 191 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
CACNA1A-216ENST00000635742 IGHV3-16A0A0C4DH30 117 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 M0R381 172 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 SERF1AO75920 110 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 INSL3P51460 131 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 MRPL51Q4U2R6 128 aaKnown RBP7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 OR10J3Q5JRS4 329 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 DMRTA1Q5VZB9 504 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 RNF185Q96GF1 192 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 MDFICQ9P1T7 246 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 MUC4Q99102 2169 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 CBY3A6NI87 242 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 EVI2AP22794 236 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 NUTF2P61970 127 aaKnown RBP7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 C9orf85Q96MD7 179 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 XCL2Q9UBD3 114 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
CACNA1A-216ENST00000635742 SMKR1H3BMG3 65 aa7.3□□□□□ -1.24
CACNA1A-216ENST00000635742 NXPH4O95158 308 aa7.3□□□□□ -1.24
CACNA1A-216ENST00000635742 INSP01308 110 aa7.3□□□□□ -1.24
CACNA1A-216ENST00000635742 PRM2P04554 102 aa7.3□□□□□ -1.24
CACNA1A-216ENST00000635742 IGLL1P15814 213 aa7.3□□□□□ -1.24
CACNA1A-216ENST00000635742 HIST1H2BLQ99880 126 aa7.3□□□□□ -1.24
CACNA1A-216ENST00000635742 D6R8Y8 96 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 WIPF1O43516 503 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 NCR2O95944 276 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 AMBPP02760 352 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 FABP4P15090 132 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 RPL35AP18077 110 aaKnown RBP7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 S100A2P29034 98 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 DEFB125Q8N687 156 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 WFDC9Q8NEX5 89 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 GEMIN7Q9H840 131 aaKnown RBP7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 U3KQK5 164 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 TRGV11A0A075B6L2 103 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 ESDP10768 282 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 HTN1P15515 57 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 C1orf158Q8N1D5 194 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 C3orf56Q8N813 242 aa7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 MCRIP2Q9BUT9 160 aaKnown RBP7.29□□□□□ -1.24
CACNA1A-216ENST00000635742 NIT2Q9NQR4 276 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms