RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 ADAMTS9Q9P2N4 1935 aa6.88□□□□□ -1.31
PATJ-216ENST00000635214 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
PATJ-216ENST00000635214 NDUFV3P56181 108 aaKnown RBP6.88□□□□□ -1.31
PATJ-216ENST00000635214 SAA4P35542 130 aa6.88□□□□□ -1.31
PATJ-216ENST00000635214 PLA2G2EQ9NZK7 142 aa6.88□□□□□ -1.31
PATJ-216ENST00000635214 IGF2BP2-AS1Q96M15 143 aa6.88□□□□□ -1.31
PATJ-216ENST00000635214 SPTBN2O15020 2390 aa6.88□□□□□ -1.31
PATJ-216ENST00000635214 TMEM131Q92545 1883 aa6.88□□□□□ -1.31
PATJ-216ENST00000635214 FER1L5A0AVI2 2057 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 IGHV3-16A0A0C4DH30 117 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 CRYGBP07316 175 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 WFDC9Q8NEX5 89 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 BRK1Q8WUW1 75 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
PATJ-216ENST00000635214 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 XCL2Q9UBD3 114 aa6.87□□□□□ -1.31
PATJ-216ENST00000635214 KLHL30-AS1Q8NEE0 82 aa6.86□□□□□ -1.31
PATJ-216ENST00000635214 SP5Q6BEB4 398 aaPredicted RBP6.86□□□□□ -1.31
PATJ-216ENST00000635214 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
PATJ-216ENST00000635214 ZNRD1Q9P1U0 126 aa6.86□□□□□ -1.31
PATJ-216ENST00000635214 HEATR5AQ86XA9 2040 aa6.86□□□□□ -1.31
PATJ-216ENST00000635214 A0A1W2PNU3 283 aaPredicted RBP6.86□□□□□ -1.31
PATJ-216ENST00000635214 PSCAO43653 123 aa6.86□□□□□ -1.31
PATJ-216ENST00000635214 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
PATJ-216ENST00000635214 E7EQL1 145 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 LGALS9O00182 355 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 PDE6GP18545 87 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 BRD3OSQ6XYD6 125 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 WDR86Q86TI4 376 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 EML5Q05BV3 1969 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 Q6ZR03 302 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 GP9P14770 177 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 COL8A2P25067 703 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 LOXP28300 417 aaPredicted RBP6.85□□□□□ -1.31
PATJ-216ENST00000635214 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 C2orf70A6NJV1 201 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 GATA1P15976 413 aaPredicted RBP6.85□□□□□ -1.31
PATJ-216ENST00000635214 ODF1Q14990 250 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 ASPHD1Q5U4P2 390 aa6.85□□□□□ -1.31
PATJ-216ENST00000635214 A0A0J9YXV3 536 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 RBX1P62877 108 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 NREPQ16612 68 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 NSUN5P1Q3KNT7 163 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 PCNX2A6NKB5 2137 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 C11orf44Q8N8P7 122 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 H3BUA1 57 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 FAM215AQ9Y5M1 114 aa6.84□□□□□ -1.31
PATJ-216ENST00000635214 J3QLI3 93 aa6.84□□□□□ -1.32
PATJ-216ENST00000635214 C3orf56Q8N813 242 aa6.84□□□□□ -1.32
PATJ-216ENST00000635214 TOMM6Q96B49 74 aa6.84□□□□□ -1.32
PATJ-216ENST00000635214 VSIG2Q96IQ7 327 aa6.84□□□□□ -1.32
PATJ-216ENST00000635214 TPSG1Q9NRR2 321 aa6.84□□□□□ -1.32
PATJ-216ENST00000635214 TRAV12-2A0A075B6T6 113 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 C17orf77Q96MU5 243 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 TRAV4A0A0B4J268 109 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 G3V318 75 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 DAD1P61803 113 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
PATJ-216ENST00000635214 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 TTTY13Q9BZ97 58 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 SHANK1Q9Y566 2161 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 YLPM1P49750 1951 aaKnown RBP6.83□□□□□ -1.32
PATJ-216ENST00000635214 PKDREJQ9NTG1 2253 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 LINC01619G3V211 115 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 CUL9Q8IWT3 2517 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 RMI2Q96E14 147 aa6.83□□□□□ -1.32
PATJ-216ENST00000635214 SPANXB1Q9NS25 103 aaPredicted RBP6.83□□□□□ -1.32
PATJ-216ENST00000635214 CNOT1A5YKK6 2376 aaKnown RBP6.83□□□□□ -1.32
PATJ-216ENST00000635214 LHBP01229 141 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 CTRLP40313 264 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 FOXE3Q13461 319 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 V9GYY9 64 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 NACAE9PAV3 2078 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 GNRH2O43555 120 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 Q8N1Y9 231 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 PTH2Q96A98 100 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 NUP210LQ5VU65 1888 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 FAM240AA0A1B0GVK7 77 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 F5H768 121 aa6.82□□□□□ -1.32
PATJ-216ENST00000635214 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
PATJ-216ENST00000635214 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
PATJ-216ENST00000635214 LRP4O75096 1905 aa6.81□□□□□ -1.32
PATJ-216ENST00000635214 RIF1Q5UIP0 2472 aaKnown RBP6.81□□□□□ -1.32
PATJ-216ENST00000635214 ZNF503-AS2A6NEH8 195 aa6.81□□□□□ -1.32
PATJ-216ENST00000635214 C3orf22Q8N5N4 141 aa6.81□□□□□ -1.32
PATJ-216ENST00000635214 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
PATJ-216ENST00000635214 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
PATJ-216ENST00000635214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
PATJ-216ENST00000635214 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms