RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ATP11AUNQ6ZP68 121 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 BAGE3Q86Y29 109 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 BAGE2Q86Y30 109 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 TMEM256Q8N2U0 113 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CYB561D1Q8N8Q1 229 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CLDND2Q8NHS1 167 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 ODF3Q96PU9 254 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 SCGB3A1Q96QR1 104 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 UPK3BQ9BT76 320 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 CXCL16Q9H2A7 254 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 THADAQ6YHU6 1953 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 C5P01031 1676 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 NEXMIFQ5QGS0 1516 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 NINQ8N4C6 2090 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 LRP4O75096 1905 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 DLG5Q8TDM6 1919 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 LOC285556D6RIA3 1793 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 TOP2BQ02880 1626 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 USP32Q8NFA0 1604 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 DSCAMO60469 2012 aa1.95□□□□□ -2.1
CNOT1-223ENST00000628857 TNS1Q9HBL0 1735 aaKnown RBP1.94□□□□□ -2.1
CNOT1-223ENST00000628857 TRAV14DV4A0A0A6YYC5 116 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 A0A1W2PQD3 144 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 C3orf84H3BNL1 204 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 NDUFC1O43677 76 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 CCKP06307 115 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 RNASE2P10153 161 aaKnown RBP1.94□□□□□ -2.1
CNOT1-223ENST00000628857 CCL4P13236 92 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 RPL27AP46776 148 aaKnown RBP1.94□□□□□ -2.1
CNOT1-223ENST00000628857 IGFL3Q6UXB1 125 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 PATE2Q6UY27 113 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 CYP2G1PQ6ZSU1 146 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
CNOT1-223ENST00000628857 C6orf201Q7Z4U5 140 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 FAM103A1Q9BTL3 118 aaKnown RBP1.94□□□□□ -2.1
CNOT1-223ENST00000628857 LINC00597Q9H2U6 94 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 SND1-IT1Q9HBX3 110 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 MGAMO43451 1857 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 TJP1Q07157 1748 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 PIKFYVEQ9Y2I7 2098 aa1.94□□□□□ -2.1
CNOT1-223ENST00000628857 ABCC8Q09428 1581 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 CDC42BPGQ6DT37 1551 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 PLXNB3Q9ULL4 1909 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 FAM208AQ9UK61 1670 aaKnown RBP1.93□□□□□ -2.1
CNOT1-223ENST00000628857 AGLP35573 1532 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 ATP7AQ04656 1500 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 GPATCH8Q9UKJ3 1502 aaKnown RBP1.93□□□□□ -2.1
CNOT1-223ENST00000628857 PLXNA2O75051 1894 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 PLXNA3P51805 1871 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 KIAA1549Q9HCM3 1950 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 THSD7BQ9C0I4 1608 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 IGHV3-74A0A0B4J1X5 117 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 IGHV1-24A0A0C4DH33 117 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 IBA57-AS1B1ANH7 110 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 E7EQL1 145 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV1-39P01597 117 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV1D-39P04432 117 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 PIRTP0C851 137 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 PEBP1P30086 187 aaKnown RBP1.93□□□□□ -2.1
CNOT1-223ENST00000628857 DYNLT1P63172 113 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 RHOHQ15669 191 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 ASB16-AS1Q495Z4 193 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 Q6P435 159 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 ZFP2Q6ZN57 461 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 C2orf91Q6ZV80 131 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 LINC00643Q86TS7 51 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 ORMDL3Q8N138 153 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 C7orf33Q8WU49 177 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 CHCHD1Q96BP2 118 aaKnown RBP1.93□□□□□ -2.1
CNOT1-223ENST00000628857 SCRT1Q9BWW7 348 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 TTTY13Q9BZ97 58 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 FGF23Q9GZV9 251 aaPredicted RBP1.93□□□□□ -2.1
CNOT1-223ENST00000628857 MRPL35Q9NZE8 188 aaKnown RBP1.93□□□□□ -2.1
CNOT1-223ENST00000628857 HIGD1BQ9P298 99 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 GNG13Q9P2W3 67 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 HILPDAQ9Y5L2 63 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 DOCK9Q9BZ29 2069 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 ZNF236Q9UL36 1845 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 ARID1AO14497 2285 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 GREB1Q4ZG55 1949 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 GTF3C1Q12789 2109 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 C3P01024 1663 aa1.93□□□□□ -2.1
CNOT1-223ENST00000628857 MYO9BQ13459 2157 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 QSER1Q2KHR3 1735 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 PKD1L3Q7Z443 1732 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 LAMA4Q16363 1823 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 IGHV3OR15-7A0A075B7D8 119 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 TRBV6-7A0A0A0MS04 114 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV1-6A0A0C4DH72 117 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 LOC285095A0A1B0GVY8 99 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 A6NN06 94 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 APCSP02743 223 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 IGKV3-11P04433 115 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 SLC25A16P16260 332 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 GCHFRP30047 84 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 EFNA4P52798 201 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 KISS1Q15726 138 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms