RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TTC32Q5I0X7 151 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 CST9LP1Q5W188 147 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 Q6ZR54 194 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 TCTE3Q8IZS6 198 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 OR4C5Q8NGB2 326 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 ZNRF2Q8NHG8 242 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 FAM213BQ8TBF2 198 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 RASL10AQ92737 203 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 HIST1H2BAQ96A08 127 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 TVP23CQ96ET8 276 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 VSIG2Q96IQ7 327 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 Q9H8V8 135 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
TCF4-249ENST00000625716 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
TCF4-249ENST00000625716 A0A096LPF7 62 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 TRAV34A0A0B4J273 112 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 FAM74A7A6NL05 159 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 FABP5P3A8MUU1 101 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 C9JCJ5 164 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 PEX7O00628 323 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 BCL2L11O43521 198 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 ORM1P02763 201 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 SFTA3P0C7M3 94 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 SEC11BP0C7V7 166 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 TPT1P13693 172 aaKnown RBP4.43□□□□□ -1.7
TCF4-249ENST00000625716 S100A4P26447 101 aaKnown RBP4.43□□□□□ -1.7
TCF4-249ENST00000625716 SRIP30626 198 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 CRYBA4P53673 196 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 ESRGQ1W209 222 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 ZNF876PQ49A33 203 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 DPPA3Q6W0C5 159 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 TMUB2Q71RG4 321 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 AKAP14Q86UN6 197 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 SFT2D1Q8WV19 159 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 ZNF479Q96JC4 524 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 TCEAL7Q9BRU2 100 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 MRPS16Q9Y3D3 137 aaKnown RBP4.43□□□□□ -1.7
TCF4-249ENST00000625716 ARL2-SNX15V9GYD0 113 aa4.43□□□□□ -1.7
TCF4-249ENST00000625716 A0A1B0GV50 99 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 RTL8CO15255 209 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 CIDEAO60543 219 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 FHITP49789 147 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 ZNF80P51504 273 aaPredicted RBP4.42□□□□□ -1.7
TCF4-249ENST00000625716 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
TCF4-249ENST00000625716 NEGR1Q7Z3B1 354 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 OR11H4Q8NGC9 324 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 FMC1Q96HJ9 113 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 TXNDC17Q9BRA2 123 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 ZFP30Q9Y2G7 519 aa4.42□□□□□ -1.7
TCF4-249ENST00000625716 TRAV9-2A0A087WT02 112 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 A0A1W2PPQ1 181 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 TEX46H3BTG2 121 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 SIVA1O15304 175 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 PAGE4O60829 102 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 S100A9P06702 114 aaKnown RBP4.41□□□□□ -1.7
TCF4-249ENST00000625716 ASIPP42127 132 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 AKR1C3P42330 323 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 LGALSLQ3ZCW2 172 aaPredicted RBP4.41□□□□□ -1.7
TCF4-249ENST00000625716 FAM162BQ5T6X4 162 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 SH2D6Q7Z4S9 175 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 Q86TA4 180 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 NHLRC2Q8NBF2 726 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 MBD3L1Q8WWY6 194 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 PRADC1Q9BSG0 188 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
TCF4-249ENST00000625716 KMT2AQ03164 3969 aa4.4□□□□□ -1.7
TCF4-249ENST00000625716 IGHV3-73A0A0B4J1V6 119 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 B4DEV8 164 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 K7EQD1 137 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 NXPH4O95158 308 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 C1QBP02746 253 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 RAB5CP51148 216 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 LYPD5Q6UWN5 251 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 PTH2Q96A98 100 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 C9orf85Q96MD7 179 aa4.4□□□□□ -1.71
TCF4-249ENST00000625716 IGKV3D-20A0A0C4DH25 116 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 TRBV6-1A0A0K0K1D8 114 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 A0A1B0GVY2 172 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 PGPEP1LA6NFU8 196 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 A8MWV9 139 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 M0R036 132 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 RS1O15537 224 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 SH2D1AO60880 128 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 LTAP01374 205 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 IFNA1P01562 189 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 RNASE3P12724 160 aaKnown RBP4.39□□□□□ -1.71
TCF4-249ENST00000625716 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
TCF4-249ENST00000625716 BTF3P20290 206 aaKnown RBP4.39□□□□□ -1.71
TCF4-249ENST00000625716 EVI2AP22794 236 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 RHOHQ15669 191 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 ZNF506Q5JVG8 444 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 CFAP126Q5VTH2 177 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 BAGE2Q86Y30 109 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 ZC2HC1AQ96GY0 325 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms