RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 Q9UFV3 132 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 DCHS2Q6V1P9 2916 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 CD40P25942 277 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 ORMDL2Q53FV1 153 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 WDR86Q86TI4 376 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 CFAP46Q8IYW2 2715 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 LINC01619G3V211 115 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
USB1-216ENST00000624720 CRIP2P52943 208 aaPredicted RBP7.1□□□□□ -1.27
USB1-216ENST00000624720 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
USB1-216ENST00000624720 FAM90A1Q86YD7 464 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 RITA1Q96K30 269 aa7.1□□□□□ -1.27
USB1-216ENST00000624720 HIVEP3Q5T1R4 2406 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 UBE2D1P51668 147 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 LINC00305Q7Z4B0 112 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 C5orf38Q86SI9 138 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 SSMEM1Q8WWF3 244 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 Q96M66 194 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 K7EMT4 169 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 SYNJ2BPP57105 145 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 SNRPD3P62318 126 aaKnown RBP7.09□□□□□ -1.27
USB1-216ENST00000624720 IGFL3Q6UXB1 125 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 MKXQ8IYA7 352 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 LY6G5BQ8NDX9 201 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 LINC01560Q8TB33 94 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 LINC01600Q96MT4 127 aa7.09□□□□□ -1.27
USB1-216ENST00000624720 AGRNO00468 2067 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
USB1-216ENST00000624720 A0A087WWL8 130 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 ACYP1P07311 99 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 TFF3Q07654 80 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 RPL18AQ02543 176 aaKnown RBP7.08□□□□□ -1.28
USB1-216ENST00000624720 C20orf204Q6ZNR8 217 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 Q6ZPA2 131 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 CRYBG3Q68DQ2 2970 aa7.08□□□□□ -1.28
USB1-216ENST00000624720 SAA4P35542 130 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 C9orf139Q6ZV77 190 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 DCTN5Q9BTE1 182 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 TMEM243Q9BU79 118 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 LAMTOR3Q9UHA4 124 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 FLNCQ14315 2725 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 A0A096LNJ9 63 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 PIGBOS1A0A0B4J2F0 54 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 IGLV2-8P01709 118 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 EEF1AKMT3Q96AZ1 226 aa7.07□□□□□ -1.28
USB1-216ENST00000624720 PRB3Q04118 309 aaPredicted RBP7.06□□□□□ -1.28
USB1-216ENST00000624720 CIRBPQ14011 172 aaKnown RBP7.06□□□□□ -1.28
USB1-216ENST00000624720 KRTAP27-1Q3LI81 207 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 PRR26Q8N8Z3 221 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 CSMD2Q7Z408 3487 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 IGHV3-43A0A0B4J1X8 118 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 A0A0G2JRQ6 117 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 DEFB108AA8MXU0 73 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 IGHV3-43DP0DP04 118 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 ZNF137PP52743 207 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 PRR20EP86478 221 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 PRR20CP86479 221 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 PRR20DP86480 221 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 PRR20BP86481 221 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 PRR20AP86496 221 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 ERCC8Q13216 396 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 DAZAP2Q15038 168 aaPredicted RBP7.06□□□□□ -1.28
USB1-216ENST00000624720 MIC13Q5XKP0 118 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 COPS9Q8WXC6 57 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 IGSF10Q6WRI0 2623 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 ZNF462Q96JM2 2506 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 FHL2Q14192 279 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 SERTAD4-AS1Q5TG53 156 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 FAM104BQ5XKR9 115 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 METTL26Q96S19 204 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 SLC25A15Q9Y619 301 aa7.06□□□□□ -1.28
USB1-216ENST00000624720 POLQO75417 2590 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 UPK2O00526 184 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 IGKV3-15P01624 115 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 GP9P14770 177 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 S1PR3Q99500 378 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 BUB3O43684 328 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 LY6HO94772 140 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 PLAUP00749 431 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 HBDP02042 147 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 EDDM3BP56851 147 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 LINC00205P59089 165 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 NDUFA11Q86Y39 141 aa7.05□□□□□ -1.28
USB1-216ENST00000624720 C17orf100A8MU93 164 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 TIMM17BO60830 172 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 RNASE2P10153 161 aaKnown RBP7.04□□□□□ -1.28
USB1-216ENST00000624720 BSPH1Q075Z2 132 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 LRRK2Q5S007 2527 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 LYNX1G3V0Z9 82 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 PSPNO60542 156 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 LYNX1P0DP58 116 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 C2orf82Q6UX34 121 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 ZNRF1Q8ND25 227 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 ITLN1Q8WWA0 313 aa7.04□□□□□ -1.28
USB1-216ENST00000624720 TANC2Q9HCD6 1990 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms