RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 TRAV1-2A0A0B4J238 106 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 PRM2P04554 102 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 RPS27P42677 84 aaKnown RBP6.3□□□□□ -1.4
CDKL5-206ENST00000623610 C17orf58Q2M2W7 97 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 NPCDR1Q9BY65 106 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 Q9H3A6 140 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 IL36BQ9NZH7 164 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 SHANK1Q9Y566 2161 aa6.3□□□□□ -1.4
CDKL5-206ENST00000623610 UBR5O95071 2799 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-206ENST00000623610 H3BSH0 61 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 TIMM17BO60830 172 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 S100A4P26447 101 aaKnown RBP6.29□□□□□ -1.4
CDKL5-206ENST00000623610 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
CDKL5-206ENST00000623610 C16orf47Q6ZP98 133 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-206ENST00000623610 CMTM2Q8TAZ6 248 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 ITLN1Q8WWA0 313 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 ITLN2Q8WWU7 325 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-206ENST00000623610 SLC25A22Q9H936 323 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 ALPK2Q86TB3 2170 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 ZGRF1Q86YA3 2104 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 C9JCJ5 164 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 IGKV1-16P04430 117 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 COL8A2P25067 703 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 RPL30P62888 115 aaKnown RBP6.29□□□□□ -1.4
CDKL5-206ENST00000623610 BSPH1Q075Z2 132 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 ZNF816Q0VGE8 651 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-206ENST00000623610 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 LRRK2Q5S007 2527 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 MPDZO75970 2070 aa6.29□□□□□ -1.4
CDKL5-206ENST00000623610 BGLAPP02818 100 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 PLA2G2AP14555 144 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
CDKL5-206ENST00000623610 ESPL1Q14674 2120 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 SCXQ7RTU7 201 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 NFE4Q86UQ8 179 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 DEFB126Q9BYW3 111 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 HIVEP3Q5T1R4 2406 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 USP9XQ93008 2570 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-206ENST00000623610 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 ADAMTSL4-AS1Q5T5F5 129 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 DIRC1Q969H9 104 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 SLC25A2Q9BXI2 301 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 ABRACLQ9P1F3 81 aa6.28□□□□□ -1.4
CDKL5-206ENST00000623610 FXYD6-FXYD2A0A087WZ82 144 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 MDFIC2A0A1B0GVS7 189 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 CCL20P78556 96 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 SPINK14Q6IE38 97 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 TOMM5Q8N4H5 51 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 OR8B2Q96RD0 313 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 FXYD6Q9H0Q3 95 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 CYTL1Q9NRR1 136 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 DOCK7Q96N67 2140 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 PCNX3Q9H6A9 2034 aa6.27□□□□□ -1.41
CDKL5-206ENST00000623610 PTHLHP12272 177 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 CXCL6P80162 114 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 CEND1Q8N111 149 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 DAND5Q8N907 189 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 C15orf53Q8NAA6 179 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 NBPF19A0A087WUL8 3843 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 UTP20O75691 2785 aaKnown RBP6.26□□□□□ -1.41
CDKL5-206ENST00000623610 TRAV17A0A0B4J275 112 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 A0A1W2PQD3 144 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 J3QKU1 62 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 ZNF714Q96N38 554 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 CELA1Q9UNI1 258 aa6.26□□□□□ -1.41
CDKL5-206ENST00000623610 SPTAN1Q13813 2472 aaKnown RBP6.26□□□□□ -1.41
CDKL5-206ENST00000623610 DIDO1Q9BTC0 2240 aaKnown RBP6.25□□□□□ -1.41
CDKL5-206ENST00000623610 PCBD1P61457 104 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 KLF9Q13886 244 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-206ENST00000623610 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-206ENST00000623610 C18orf65Q6ZTR6 163 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 SMIM4Q8WVI0 70 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 DNAJC13O75165 2243 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 ZNF407Q9C0G0 2248 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
CDKL5-206ENST00000623610 C17orf112F2Z3M2 114 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 ZNF324O75467 553 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-206ENST00000623610 PDPNQ86YL7 162 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 UPK3BQ9BT76 320 aa6.25□□□□□ -1.41
CDKL5-206ENST00000623610 DOPEY2Q9Y3R5 2298 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 SPTBN1Q01082 2364 aaKnown RBP6.24□□□□□ -1.41
CDKL5-206ENST00000623610 GTF3C1Q12789 2109 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 PCNX1Q96RV3 2341 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 UBE2L5PA0A1B0GUS4 154 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 IGHV3-7P01780 117 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 UBE2L3P68036 154 aaKnown RBP6.24□□□□□ -1.41
CDKL5-206ENST00000623610 KISS1Q15726 138 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 PTPN13Q12923 2485 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 FREM3P0C091 2139 aa6.24□□□□□ -1.41
CDKL5-206ENST00000623610 ADGRG4Q8IZF6 3080 aa6.23□□□□□ -1.41
CDKL5-206ENST00000623610 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
CDKL5-206ENST00000623610 ATOX1O00244 68 aa6.23□□□□□ -1.41
CDKL5-206ENST00000623610 FUSP35637 526 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDKL5-206ENST00000623610 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
CDKL5-206ENST00000623610 TMEM14AQ9Y6G1 99 aa6.23□□□□□ -1.41
CDKL5-206ENST00000623610 HECTD1Q9ULT8 2610 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms