RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ANAPC16Q96DE5 110 aa14.17□□□□□ -0.14
PDLIM2-221ENST00000622702 DKK2Q9UBU2 259 aa14.17□□□□□ -0.14
PDLIM2-221ENST00000622702 TEX48A0A1B0GUV7 120 aa14.16□□□□□ -0.14
PDLIM2-221ENST00000622702 A0A1W2PPQ1 181 aa14.16□□□□□ -0.14
PDLIM2-221ENST00000622702 FAM231BA6NCW3 169 aa14.16□□□□□ -0.14
PDLIM2-221ENST00000622702 SNAI2O43623 268 aa14.16□□□□□ -0.14
PDLIM2-221ENST00000622702 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
PDLIM2-221ENST00000622702 GFRA4Q9GZZ7 299 aa14.16□□□□□ -0.14
PDLIM2-221ENST00000622702 MUC4Q99102 2169 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 M0R2P5 195 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 SPINK4O60575 86 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 FOXA3P55318 350 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 RHEBQ15382 184 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 LGALS9BQ3B8N2 356 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 FAM222AQ5U5X8 452 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 GTSF1Q8WW33 167 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 PTH2Q96A98 100 aa14.15□□□□□ -0.14
PDLIM2-221ENST00000622702 SNAPINO95295 136 aa14.14□□□□□ -0.15
PDLIM2-221ENST00000622702 SPART-AS1P0CW21 52 aa14.14□□□□□ -0.15
PDLIM2-221ENST00000622702 LINC00612Q8N6U2 182 aa14.14□□□□□ -0.15
PDLIM2-221ENST00000622702 CTDSP1Q9GZU7 261 aa14.14□□□□□ -0.15
PDLIM2-221ENST00000622702 CELA1Q9UNI1 258 aa14.14□□□□□ -0.15
PDLIM2-221ENST00000622702 C7orf77A4D0Y5 90 aa14.13□□□□□ -0.15
PDLIM2-221ENST00000622702 F2Z2F3 143 aa14.13□□□□□ -0.15
PDLIM2-221ENST00000622702 C3orf84H3BNL1 204 aa14.13□□□□□ -0.15
PDLIM2-221ENST00000622702 CTRLP40313 264 aa14.13□□□□□ -0.15
PDLIM2-221ENST00000622702 RASL10AQ92737 203 aa14.13□□□□□ -0.15
PDLIM2-221ENST00000622702 PHLDA3Q9Y5J5 127 aa14.13□□□□□ -0.15
PDLIM2-221ENST00000622702 CSMD3Q7Z407 3707 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 A0A087WWC5 75 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 SMIM27A0A1W2PRY6 76 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 PIK3CD-AS1Q5SR53 167 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 Q6ZTI0 123 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 NDUFAF3Q9BU61 184 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 TRGV1A0A0A0MS02 117 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 CXorf65A6NEN9 183 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 HIGD1CA8MV81 97 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 ZNF876PQ49A33 203 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 LYZL1Q6UWQ5 148 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 OR10AG1Q8NH19 301 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 TPPP3Q9BW30 176 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 CNFNQ9BYD5 112 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 TMEM242Q9NWH2 141 aa14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 MRPL16Q9NX20 251 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-221ENST00000622702 NXPH4O95158 308 aa14.11□□□□□ -0.15
PDLIM2-221ENST00000622702 ZFAND6Q6FIF0 208 aa14.11□□□□□ -0.15
PDLIM2-221ENST00000622702 ZFP82Q8N141 532 aa14.11□□□□□ -0.15
PDLIM2-221ENST00000622702 WDR73Q6P4I2 378 aa14.1□□□□□ -0.15
PDLIM2-221ENST00000622702 SYT8Q8NBV8 401 aa14.1□□□□□ -0.15
PDLIM2-221ENST00000622702 C18orf15Q96N68 181 aa14.1□□□□□ -0.15
PDLIM2-221ENST00000622702 NAT8BQ9UHF3 227 aa14.1□□□□□ -0.15
PDLIM2-221ENST00000622702 IGHV4-4A0A075B6R2 117 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 GAGE12BA1L429 117 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 GAGE7O76087 117 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 GAGE12FP0CL80 117 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 GAGE12GP0CL81 117 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 GAGE12IP0CL82 117 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 CACNG7P62955 275 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 DMRTA1Q5VZB9 504 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 NUP35Q8NFH5 326 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 C11orf45Q8TAV5 145 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 PGLYRP4Q96LB8 373 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 RPS10P5Q9NQ39 176 aa14.09□□□□□ -0.15
PDLIM2-221ENST00000622702 M0R381 172 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 DEFB130BP0DP73 79 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 DEFB130AP0DP74 79 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 DAD1P61803 113 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 CASC10Q5T4H9 136 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 SPANXN1Q5VSR9 72 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 IMMP2LQ96T52 175 aa14.08□□□□□ -0.16
PDLIM2-221ENST00000622702 MUC21A0A0G2JKD1 596 aa14.07□□□□□ -0.16
PDLIM2-221ENST00000622702 MUC21A0A140T8X8 626 aa14.07□□□□□ -0.16
PDLIM2-221ENST00000622702 C12orf74Q32Q52 190 aa14.07□□□□□ -0.16
PDLIM2-221ENST00000622702 STARD9Q9P2P6 4700 aa14.07□□□□□ -0.16
PDLIM2-221ENST00000622702 TRGV2A0A075B6R0 118 aa14.06□□□□□ -0.16
PDLIM2-221ENST00000622702 BORCS7Q96B45 105 aa14.06□□□□□ -0.16
PDLIM2-221ENST00000622702 A0A1B0GUT8 65 aa14.05□□□□□ -0.16
PDLIM2-221ENST00000622702 A8MWV9 139 aa14.05□□□□□ -0.16
PDLIM2-221ENST00000622702 NTF3P20783 257 aa14.05□□□□□ -0.16
PDLIM2-221ENST00000622702 NANOS2P60321 138 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-221ENST00000622702 ATRAIDQ6UW56 229 aa14.05□□□□□ -0.16
PDLIM2-221ENST00000622702 TENM2Q9NT68 2774 aa14.04□□□□□ -0.16
PDLIM2-221ENST00000622702 TRAV4A0A0B4J268 109 aa14.04□□□□□ -0.16
PDLIM2-221ENST00000622702 RS1O15537 224 aa14.04□□□□□ -0.16
PDLIM2-221ENST00000622702 ATP6V1G1O75348 118 aa14.04□□□□□ -0.16
PDLIM2-221ENST00000622702 POM121L12Q8N7R1 296 aa14.04□□□□□ -0.16
PDLIM2-221ENST00000622702 FAM3BP58499 235 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-221ENST00000622702 SSTP61278 116 aa14.03□□□□□ -0.16
PDLIM2-221ENST00000622702 CFAP126Q5VTH2 177 aa14.03□□□□□ -0.16
PDLIM2-221ENST00000622702 MSRB1Q9NZV6 116 aa14.03□□□□□ -0.16
PDLIM2-221ENST00000622702 TWIST1Q15672 202 aa14.02□□□□□ -0.16
PDLIM2-221ENST00000622702 KCNIP4Q6PIL6 250 aa14.02□□□□□ -0.16
PDLIM2-221ENST00000622702 Q6ZTC4 211 aa14.02□□□□□ -0.16
PDLIM2-221ENST00000622702 AP1S3Q96PC3 154 aa14.02□□□□□ -0.16
PDLIM2-221ENST00000622702 JPT2Q9H910 190 aa14.02□□□□□ -0.16
PDLIM2-221ENST00000622702 CIDEAO60543 219 aa14.01□□□□□ -0.17
PDLIM2-221ENST00000622702 ATP5G1P05496 136 aa14.01□□□□□ -0.17
PDLIM2-221ENST00000622702 S100A1P23297 94 aa14.01□□□□□ -0.17
PDLIM2-221ENST00000622702 RIGQ13278 110 aa14.01□□□□□ -0.17
PDLIM2-221ENST00000622702 OR4C5Q8NGB2 326 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms