RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ALKAL2Q6UX46 152 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 AAED1Q7RTV5 226 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 BPIFA4PQ86YQ2 179 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 H1FXQ92522 213 aaKnown RBP1.85□□□□□ -2.11
CPNE3-213ENST00000622183 TSLPQ969D9 159 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 GINS4Q9BRT9 223 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 BCL2L10Q9HD36 194 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 RABAC1Q9UI14 185 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 ROBO1Q9Y6N7 1651 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 UBR1Q8IWV7 1749 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 WDR90Q96KV7 1748 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 KCPQ6ZWJ8 1503 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 MCM3APO60318 1980 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 PTPRBP23467 1997 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 LAMB2P55268 1798 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 ANKRD36CQ5JPF3 1778 aa1.85□□□□□ -2.11
CPNE3-213ENST00000622183 NESP48681 1621 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 EIF2AK4Q9P2K8 1649 aaKnown RBP1.84□□□□□ -2.11
CPNE3-213ENST00000622183 C5P01031 1676 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 CLTCQ00610 1675 aaKnown RBP1.84□□□□□ -2.11
CPNE3-213ENST00000622183 PREX1Q8TCU6 1659 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 TRAV12-2A0A075B6T6 113 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 TRAV27A0A087WT01 109 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 A0A087X0T9 212 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 IGHV1-58A0A0C4DH39 117 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 F8W1H4 67 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 GABARAPH6UMI1 98 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 GEMIN2O14893 280 aaKnown RBP1.84□□□□□ -2.11
CPNE3-213ENST00000622183 PITX3O75364 302 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 IGLC2P0DOY2 106 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 IGLC3P0DOY3 106 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 IFITM1P13164 125 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 FABP4P15090 132 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 ASIPP42127 132 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 RTL8BQ17RB0 113 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 LYRM7Q5U5X0 104 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 C22orf39Q6P5X5 142 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 UNQ5815/PRO19632Q6UWF5 114 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 C7orf65Q6ZTY9 151 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 PHF5AQ7RTV0 110 aaKnown RBP1.84□□□□□ -2.11
CPNE3-213ENST00000622183 C10orf126Q8N4M7 172 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 C9orf163Q8N9P6 203 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 RAB37Q96AX2 223 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 ATG5Q9H1Y0 275 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 NAA60Q9H7X0 242 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 FKBP11Q9NYL4 201 aa1.84□□□□□ -2.11
CPNE3-213ENST00000622183 STRCP1A6NGW2 1772 aa1.84□□□□□ -2.12
CPNE3-213ENST00000622183 DSPPQ9NZW4 1301 aa1.84□□□□□ -2.12
CPNE3-213ENST00000622183 PLXNA3P51805 1871 aa1.84□□□□□ -2.12
CPNE3-213ENST00000622183 KIAA2026Q5HYC2 2103 aa1.84□□□□□ -2.12
CPNE3-213ENST00000622183 DOCK10Q96BY6 2186 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 TNRC6AQ8NDV7 1962 aaKnown RBP1.83□□□□□ -2.12
CPNE3-213ENST00000622183 CCDC88CQ9P219 2028 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 C19orf84I3L1E1 186 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 KLF7O75840 302 aaPredicted RBP1.83□□□□□ -2.12
CPNE3-213ENST00000622183 PROSCO94903 275 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 SFT2D2O95562 160 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 TRGC2P03986 189 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 S100A4P26447 101 aaKnown RBP1.83□□□□□ -2.12
CPNE3-213ENST00000622183 GNG11P61952 73 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 SEC11AP67812 179 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 Q56UQ5 140 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 LINC01545Q5VT33 79 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 XAF1Q6GPH4 301 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 TEN1Q86WV5 123 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 LINC00311Q8N616 119 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 OR8B3Q8NGG8 313 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 OR5D16Q8NGK9 328 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 PFN4Q8NHR9 129 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 BORCS8Q96FH0 119 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 LINC01600Q96MT4 127 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 TCEAL2Q9H3H9 227 aaPredicted RBP1.83□□□□□ -2.12
CPNE3-213ENST00000622183 OTORQ9NRC9 128 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 SLC39A9Q9NUM3 307 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 TMEM242Q9NWH2 141 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 ERCC6L2Q5T890 1561 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 RREB1Q92766 1687 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 ALS2Q96Q42 1657 aa1.83□□□□□ -2.12
CPNE3-213ENST00000622183 TSC2P49815 1807 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 ANAPC1Q9H1A4 1944 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 TRGV2A0A075B6R0 118 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 TRBV7-7A0A0K0K1E9 115 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 C3orf85A0A1B0GTC6 90 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 FAM236AA0A1B0GUQ0 79 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 FAM236BA0A1B0GV22 79 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 OR2T8A6NH00 312 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 IBA57-AS1B1ANH7 110 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 H3BRM9 83 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 NDUFB6O95139 128 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 UBL3O95164 117 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 GYPAP02724 150 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 MT-ATP8P03928 68 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 ZNF705BP0CI00 300 aaPredicted RBP1.82□□□□□ -2.12
CPNE3-213ENST00000622183 SRP14P37108 136 aaKnown RBP1.82□□□□□ -2.12
CPNE3-213ENST00000622183 POLR2JP52435 117 aaKnown RBP1.82□□□□□ -2.12
CPNE3-213ENST00000622183 ZNF345Q14585 488 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 Q1T7F1 81 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 COPS9Q8WXC6 57 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 MUCL1Q96DR8 90 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms