RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 C2orf88Q9BSF0 95 aa13.71□□□□□ -0.21
SEMA6C-210ENST00000621728 A8MTW9 85 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 ORM1P02763 201 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 RIGQ13278 110 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 RCHY1Q96PM5 261 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 MCRIP2Q9BUT9 160 aaKnown RBP13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 A0A1B0GV90 55 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 TMEM189A5PLL7 270 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 LEPP41159 167 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 OXLD1Q5BKU9 147 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 PGLYRP4Q96LB8 373 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 ODF3Q96PU9 254 aa13.7□□□□□ -0.22
SEMA6C-210ENST00000621728 TRAV12-3A0A0B4J271 114 aa13.69□□□□□ -0.22
SEMA6C-210ENST00000621728 IGKV3D-20A0A0C4DH25 116 aa13.69□□□□□ -0.22
SEMA6C-210ENST00000621728 TRBV7-9A0A0J9YWB2 115 aa13.69□□□□□ -0.22
SEMA6C-210ENST00000621728 BORCS7Q96B45 105 aa13.69□□□□□ -0.22
SEMA6C-210ENST00000621728 CHCHD1Q96BP2 118 aaKnown RBP13.69□□□□□ -0.22
SEMA6C-210ENST00000621728 A0A1B0GUT8 65 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 HSBP1O75506 76 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 MUC21Q5SSG8 566 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 STHQ8IWL8 128 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 DEFB125Q8N687 156 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 PMCHP20382 165 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 CDKN1BP46527 198 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 VAMP8Q9BV40 100 aa13.68□□□□□ -0.22
SEMA6C-210ENST00000621728 C7orf71A4D174 169 aa13.67□□□□□ -0.22
SEMA6C-210ENST00000621728 RPS20P60866 119 aaKnown RBP13.67□□□□□ -0.22
SEMA6C-210ENST00000621728 TRPT1Q86TN4 253 aaKnown RBP13.67□□□□□ -0.22
SEMA6C-210ENST00000621728 NIT1Q86X76 327 aa13.67□□□□□ -0.22
SEMA6C-210ENST00000621728 TRAV21A0A0B4J279 112 aa13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 CRXO43186 299 aaPredicted RBP13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 RBMY1A1P0DJD3 496 aaKnown RBP13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 RBMY1CP0DJD4 496 aa13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 KRTDAPP60985 99 aa13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 RBMY1FQ15415 496 aaKnown RBP13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 LINC01559Q495D7 138 aa13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 LOC102724200A0A096LPH7 203 aaPredicted RBP13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 SSBP4Q9BWG4 385 aaPredicted RBP13.66□□□□□ -0.22
SEMA6C-210ENST00000621728 WIPF1O43516 503 aa13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 RPL35AP18077 110 aaKnown RBP13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 TSPOP30536 169 aa13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 PMCHL1Q16048 86 aa13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 ANXA2RQ3ZCQ2 193 aa13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 TPPP3Q9BW30 176 aa13.65□□□□□ -0.22
SEMA6C-210ENST00000621728 MUC21A0A0G2JKD1 596 aa13.64□□□□□ -0.23
SEMA6C-210ENST00000621728 MUC21A0A140T8X8 626 aa13.64□□□□□ -0.23
SEMA6C-210ENST00000621728 GTSCR1Q86UQ5 136 aa13.64□□□□□ -0.23
SEMA6C-210ENST00000621728 Q8N976 141 aa13.64□□□□□ -0.23
SEMA6C-210ENST00000621728 MIEN1Q9BRT3 115 aa13.64□□□□□ -0.23
SEMA6C-210ENST00000621728 OR5AL1P0C617 328 aa13.63□□□□□ -0.23
SEMA6C-210ENST00000621728 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
SEMA6C-210ENST00000621728 PRR31Q5SQ13 230 aa13.63□□□□□ -0.23
SEMA6C-210ENST00000621728 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
SEMA6C-210ENST00000621728 TCAPO15273 167 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 GNRH2O43555 120 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 ZNF493Q6ZR52 646 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 C20orf202A1L168 122 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 SPRY2O43597 315 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 NTF3P20783 257 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 KRTAP10-11P60412 298 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 RNASEKQ6P5S7 137 aaKnown RBP13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 Q8N1Y9 231 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 CLUHP3Q96NS8 147 aa13.62□□□□□ -0.23
SEMA6C-210ENST00000621728 PRM2P04554 102 aa13.61□□□□□ -0.23
SEMA6C-210ENST00000621728 LYZL1Q6UWQ5 148 aa13.61□□□□□ -0.23
SEMA6C-210ENST00000621728 M0R143 59 aa13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 ARMS2P0C7Q2 107 aa13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 IGLC6P0CF74 106 aa13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 FAM19A2Q8N3H0 131 aa13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 G3V4G9 280 aa13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 GIG44P09565 113 aaPredicted RBP13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 FER1L6-AS1Q8NA97 138 aa13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 TIMM8BQ9Y5J9 83 aaPredicted RBP13.6□□□□□ -0.23
SEMA6C-210ENST00000621728 LINC00614P0C842 121 aa13.59□□□□□ -0.23
SEMA6C-210ENST00000621728 H3BVH4 76 aa13.58□□□□□ -0.23
SEMA6C-210ENST00000621728 CTRLP40313 264 aa13.58□□□□□ -0.23
SEMA6C-210ENST00000621728 PCP4P48539 62 aa13.58□□□□□ -0.23
SEMA6C-210ENST00000621728 FAM159AQ6UWV7 190 aa13.58□□□□□ -0.23
SEMA6C-210ENST00000621728 HTN1P15515 57 aa13.58□□□□□ -0.24
SEMA6C-210ENST00000621728 URB1-AS1Q96HZ7 61 aa13.58□□□□□ -0.24
SEMA6C-210ENST00000621728 PAM16Q9Y3D7 125 aa13.58□□□□□ -0.24
SEMA6C-210ENST00000621728 INSP01308 110 aa13.57□□□□□ -0.24
SEMA6C-210ENST00000621728 DNAH3Q8TD57 4116 aa13.57□□□□□ -0.24
SEMA6C-210ENST00000621728 IGHV1OR15-1A0A075B7D0 117 aa13.56□□□□□ -0.24
SEMA6C-210ENST00000621728 TMEM70Q9BUB7 260 aa13.56□□□□□ -0.24
SEMA6C-210ENST00000621728 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
SEMA6C-210ENST00000621728 TDRG1Q3Y452 100 aa13.56□□□□□ -0.24
SEMA6C-210ENST00000621728 C1orf158Q8N1D5 194 aa13.56□□□□□ -0.24
SEMA6C-210ENST00000621728 IGHV3OR16-12A0A075B7B8 117 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 RNASE3P12724 160 aaKnown RBP13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 ASIPP42127 132 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 SPATA45Q537H7 98 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 OR10AG1Q8NH19 301 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 MDFICQ9P1T7 246 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 UQCR10Q9UDW1 63 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 U3KQK5 164 aa13.55□□□□□ -0.24
SEMA6C-210ENST00000621728 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms