RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 SDK2Q58EX2 2172 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 SPTAN1Q13813 2472 aaKnown RBP3.89□□□□□ -1.79
MATR3-228ENST00000620916 TRAV12-1A0A0B4J245 112 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 TRAV41A0A0B4J266 112 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 CFC1BP0CG36 223 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 CFC1P0CG37 223 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 FCER1GP30273 86 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 SAA4P35542 130 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 IFI27P40305 119 aaPredicted RBP3.89□□□□□ -1.79
MATR3-228ENST00000620916 EDDM3BP56851 147 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 C2orf82Q6UX34 121 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 SSMEM1Q8WWF3 244 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 TMEM243Q9BU79 118 aa3.89□□□□□ -1.79
MATR3-228ENST00000620916 PHPT1Q9NRX4 125 aaPredicted RBP3.89□□□□□ -1.79
MATR3-228ENST00000620916 TLN1Q9Y490 2541 aaKnown RBP3.89□□□□□ -1.79
MATR3-228ENST00000620916 TRBV6-6A0A0A6YYG2 114 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 IGHV3-33P01772 117 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 DEFA4P12838 97 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 ZNF22P17026 224 aaPredicted RBP3.88□□□□□ -1.79
MATR3-228ENST00000620916 APOC4P55056 127 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 ORMDL2Q53FV1 153 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 DOPEY1Q5JWR5 2465 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 COX14Q96I36 57 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 NABP2Q9BQ15 211 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 DEPPQ9NTK1 212 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 RBM12B-AS1Q9P1G2 102 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 FBN3Q75N90 2809 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 IGKV1D-13A0A0B4J2D9 117 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 IGKV1-13P0DP09 117 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 ZNF134P52741 427 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 Q6JHZ5 121 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 Q6ZPA2 131 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 SPACA5Q96QH8 159 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 CCL28Q9NRJ3 127 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 TRBV6-1A0A0K0K1D8 114 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 A0A1B0GUT8 65 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 IBA57-AS1B1ANH7 110 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 H7C423 109 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 FOXF2Q12947 444 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 FOXL2NBQ6ZUU3 175 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 RNASE6Q93091 150 aaKnown RBP3.88□□□□□ -1.79
MATR3-228ENST00000620916 TSACCQ96A04 125 aaPredicted RBP3.88□□□□□ -1.79
MATR3-228ENST00000620916 VSIG2Q96IQ7 327 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 TAC3Q9UHF0 121 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 ARID1AO14497 2285 aa3.88□□□□□ -1.79
MATR3-228ENST00000620916 PVRIGQ6DKI7 326 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 DCANP1Q8TF63 244 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 HES7Q9BYE0 225 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 MED13Q9UHV7 2174 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 SHANK1Q9Y566 2161 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 ICE1Q9Y2F5 2266 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 H7BZZ5 65 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 M0R135 149 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 FGF12P61328 243 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 SNRPD3P62318 126 aaKnown RBP3.87□□□□□ -1.79
MATR3-228ENST00000620916 GFRALQ6UXV0 394 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 SLC50A1Q9BRV3 221 aa3.87□□□□□ -1.79
MATR3-228ENST00000620916 NDUFC1O43677 76 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 MIC13Q5XKP0 118 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 TMEM263Q8WUH6 116 aaKnown RBP3.86□□□□□ -1.79
MATR3-228ENST00000620916 ITLN2Q8WWU7 325 aaPredicted RBP3.86□□□□□ -1.79
MATR3-228ENST00000620916 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 AGRNO00468 2067 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 A0A1W2PQD3 144 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 CCKP06307 115 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 RNASE1P07998 156 aaKnown RBP3.86□□□□□ -1.79
MATR3-228ENST00000620916 SPINT3P49223 89 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 KLKP1Q107X0 134 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 Q8N2B8 174 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 ABCA2Q9BZC7 2435 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 HEATR5BQ9P2D3 2071 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.86□□□□□ -1.79
MATR3-228ENST00000620916 NDUFB3O43676 98 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 CD24P25063 80 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 ZNF714Q96N38 554 aa3.86□□□□□ -1.79
MATR3-228ENST00000620916 ITPR2Q14571 2701 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 ARHGEF17Q96PE2 2063 aaPredicted RBP3.85□□□□□ -1.79
MATR3-228ENST00000620916 SPRY3O43610 288 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 LYPD5Q6UWN5 251 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 ZNF329Q86UD4 541 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 PROK2Q9HC23 129 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 RP1P56715 2156 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 NOTCH2Q04721 2471 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 TMEM202A6NGA9 273 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 IQCF6A8MYZ5 107 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 F8VRH5 84 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 TIMM17BO60830 172 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 IGLV2-14P01704 120 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 ZNF137PP52743 207 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 IGLV3-21P80748 117 aaPredicted RBP3.85□□□□□ -1.79
MATR3-228ENST00000620916 SERTAD4-AS1Q5TG53 156 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 LY6G5BQ8NDX9 201 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 FDCSPQ8NFU4 85 aa3.85□□□□□ -1.79
MATR3-228ENST00000620916 ITLN1Q8WWA0 313 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms