RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 COX7A2LO14548 114 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 IGHG2P01859 326 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 C11orf52Q96A22 123 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 F8VRH5 84 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 ABCA4P78363 2273 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 K7EMT4 169 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 CD5LO43866 347 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 WFDC11Q8NEX6 87 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 TM2D2Q9BX73 214 aa8.81□□□□□ -1
CLIP1-219ENST00000620786 LGALS9BQ3B8N2 356 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 LGALS9CQ6DKI2 356 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 GPHB5Q86YW7 130 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 SPANXA1Q9NS26 97 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 K7EN84 100 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 Q9H8V8 135 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 GPR179Q6PRD1 2367 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 HIST2H2BCQ6DN03 193 aa8.8□□□□□ -1
CLIP1-219ENST00000620786 NCKAP5O14513 1909 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 RIF1Q5UIP0 2472 aaKnown RBP8.79□□□□□ -1
CLIP1-219ENST00000620786 FGF6P10767 208 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 HAMPP81172 84 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 DEFB125Q8N687 156 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
CLIP1-219ENST00000620786 MRPL36Q9P0J6 103 aaKnown RBP8.79□□□□□ -1
CLIP1-219ENST00000620786 C2orf16Q68DN1 1984 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 hADV29S1A0JD25 119 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 TEX22C9J3V5 150 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 UBL5Q9BZL1 73 aa8.79□□□□□ -1
CLIP1-219ENST00000620786 WI2-2373I1.2A0A1W2PRP0 233 aa8.78□□□□□ -1
CLIP1-219ENST00000620786 Q6ZWC4 215 aa8.78□□□□□ -1
CLIP1-219ENST00000620786 Q8N1Y9 231 aa8.78□□□□□ -1
CLIP1-219ENST00000620786 HEATR5AQ86XA9 2040 aa8.78□□□□□ -1
CLIP1-219ENST00000620786 DENND4CQ5VZ89 1909 aa8.78□□□□□ -1
CLIP1-219ENST00000620786 IGKV1-17P01599 117 aa8.78□□□□□ -1
CLIP1-219ENST00000620786 TNFRSF13BO14836 293 aaPredicted RBP8.78□□□□□ -1
CLIP1-219ENST00000620786 GATA1P15976 413 aaPredicted RBP8.77□□□□□ -1
CLIP1-219ENST00000620786 UBE2AP49459 152 aa8.77□□□□□ -1
CLIP1-219ENST00000620786 HERV-K104P63124 156 aa8.77□□□□□ -1
CLIP1-219ENST00000620786 IGLV1-47P01700 117 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 TRBV12-3P01733 135 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 POLR3KQ9Y2Y1 108 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-219ENST00000620786 KMT2EQ8IZD2 1858 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 IGHG4P01861 327 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 C11orf45Q8TAV5 145 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 DKK2Q9UBU2 259 aa8.77□□□□□ -1.01
CLIP1-219ENST00000620786 PYY3Q5JQD4 70 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 TIMM17AQ99595 171 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 ARFGEF3Q5TH69 2177 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 K7EMI3 77 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 FANCD2OSQ96PS1 177 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 SPTBN1Q01082 2364 aaKnown RBP8.76□□□□□ -1.01
CLIP1-219ENST00000620786 COL4A4P53420 1690 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-219ENST00000620786 Q6YL49 198 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 CEND1Q8N111 149 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 LTBP2Q14767 1821 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 PRO1854Q9UHT4 67 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 MSMPQ1L6U9 139 aa8.76□□□□□ -1.01
CLIP1-219ENST00000620786 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 Q6ZSR3 168 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 PKDREJQ9NTG1 2253 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 DOCK9Q9BZ29 2069 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 TRAV12-1A0A0B4J245 112 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 ODF3L1Q8IXM7 274 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 MAP6D1Q9H9H5 199 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 NDUFA1O15239 70 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 PROP1O75360 226 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 LMO4P61968 165 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 TMEM61Q8N0U2 210 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 COX7B2Q8TF08 81 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 RNF183Q96D59 192 aa8.75□□□□□ -1.01
CLIP1-219ENST00000620786 C9orf47Q6ZRZ4 202 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 CARD19Q96LW7 228 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 TMEM131Q92545 1883 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 COX8AP10176 69 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 UNQ9165/PRO28630Q6UXU0 137 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 COL4A3Q01955 1670 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 DEFB1P60022 68 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 VSIG2Q96IQ7 327 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 UTF1Q5T230 341 aa8.74□□□□□ -1.01
CLIP1-219ENST00000620786 LY6G6DO95868 133 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 PLXNB3Q9ULL4 1909 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 SHISA2Q6UWI4 295 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 ZFP2Q6ZN57 461 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 TMEM263Q8WUH6 116 aaKnown RBP8.73□□□□□ -1.01
CLIP1-219ENST00000620786 NCR3O14931 201 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 BVES-AS1Q5T3Y7 98 aa8.73□□□□□ -1.01
CLIP1-219ENST00000620786 MRPL52Q86TS9 123 aaKnown RBP8.72□□□□□ -1.01
CLIP1-219ENST00000620786 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
CLIP1-219ENST00000620786 IGLL1P15814 213 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms