RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 TMEM208Q9BTX3 173 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 TP53TG3Q9ULZ0 132 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 VWFP04275 2813 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 M0R381 172 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 MORN3Q6PF18 240 aaPredicted RBP12.13□□□□□ -0.47
PCGF3-213ENST00000620529 LINC01587Q99440 93 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 C1QTNF4Q9BXJ3 329 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
PCGF3-213ENST00000620529 LOC102724200A0A096LPH7 203 aaPredicted RBP12.12□□□□□ -0.47
PCGF3-213ENST00000620529 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
PCGF3-213ENST00000620529 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
PCGF3-213ENST00000620529 CTAG1AP78358 180 aa12.12□□□□□ -0.47
PCGF3-213ENST00000620529 TMEM256Q8N2U0 113 aa12.12□□□□□ -0.47
PCGF3-213ENST00000620529 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
PCGF3-213ENST00000620529 AMN1Q8IY45 258 aa12.11□□□□□ -0.47
PCGF3-213ENST00000620529 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
PCGF3-213ENST00000620529 MUC4Q99102 2169 aa12.11□□□□□ -0.47
PCGF3-213ENST00000620529 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
PCGF3-213ENST00000620529 LINC00467Q9BRT7 94 aa12.1□□□□□ -0.47
PCGF3-213ENST00000620529 IGHV3OR16-12A0A075B7B8 117 aa12.1□□□□□ -0.47
PCGF3-213ENST00000620529 SPRY2O43597 315 aa12.1□□□□□ -0.47
PCGF3-213ENST00000620529 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
PCGF3-213ENST00000620529 SYT8Q8NBV8 401 aa12.1□□□□□ -0.47
PCGF3-213ENST00000620529 ALKBH7Q9BT30 221 aaPredicted RBP12.1□□□□□ -0.47
PCGF3-213ENST00000620529 ZNF415Q09FC8 603 aa12.09□□□□□ -0.47
PCGF3-213ENST00000620529 BAGE3Q86Y29 109 aa12.09□□□□□ -0.47
PCGF3-213ENST00000620529 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
PCGF3-213ENST00000620529 GOLT1BQ9Y3E0 138 aa12.09□□□□□ -0.47
PCGF3-213ENST00000620529 UBE2CO00762 179 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 HOXA5P20719 270 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 EVI2AP22794 236 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 Q0VG73 95 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
PCGF3-213ENST00000620529 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 STAB1Q9NY15 2570 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 NXPH4O95158 308 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
PCGF3-213ENST00000620529 MRPL51Q4U2R6 128 aaKnown RBP12.07□□□□□ -0.48
PCGF3-213ENST00000620529 OXLD1Q5BKU9 147 aa12.07□□□□□ -0.48
PCGF3-213ENST00000620529 CSTL1Q9H114 145 aa12.07□□□□□ -0.48
PCGF3-213ENST00000620529 D6R8Y8 96 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 RAB4AP20338 218 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 S100A2P29034 98 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 CKS2P33552 79 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 C18orf32Q8TCD1 76 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 ZMAT5Q9UDW3 170 aaKnown RBP12.06□□□□□ -0.48
PCGF3-213ENST00000620529 GIG44P09565 113 aaPredicted RBP12.06□□□□□ -0.48
PCGF3-213ENST00000620529 SMIM17P0DL12 118 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
PCGF3-213ENST00000620529 PPBPP02775 128 aa12.05□□□□□ -0.48
PCGF3-213ENST00000620529 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
PCGF3-213ENST00000620529 PRM2P04554 102 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 IQCJQ1A5X6 159 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 HIST3H2BBQ8N257 126 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 C14orf178Q8N769 122 aaPredicted RBP12.04□□□□□ -0.48
PCGF3-213ENST00000620529 PRELID3AQ96N28 172 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 TRRAPQ9Y4A5 3859 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 GSN-AS1Q9NRJ2 163 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 U3KQK5 164 aa12.04□□□□□ -0.48
PCGF3-213ENST00000620529 SERF1AO75920 110 aa12.03□□□□□ -0.48
PCGF3-213ENST00000620529 MGPP08493 103 aa12.03□□□□□ -0.48
PCGF3-213ENST00000620529 SPXQ9BT56 116 aa12.03□□□□□ -0.48
PCGF3-213ENST00000620529 M0R2P5 195 aa12.02□□□□□ -0.48
PCGF3-213ENST00000620529 NCR2O95944 276 aa12.02□□□□□ -0.48
PCGF3-213ENST00000620529 APOC4P55056 127 aa12.02□□□□□ -0.48
PCGF3-213ENST00000620529 C11orf72Q8NBR9 251 aa12.02□□□□□ -0.48
PCGF3-213ENST00000620529 CSNK1G2-AS1Q8NCQ2 148 aa12.02□□□□□ -0.48
PCGF3-213ENST00000620529 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.48
PCGF3-213ENST00000620529 SMKR1H3BMG3 65 aa12.02□□□□□ -0.49
PCGF3-213ENST00000620529 AZU1P20160 251 aa12.02□□□□□ -0.49
PCGF3-213ENST00000620529 AKR1D1P51857 326 aa12.02□□□□□ -0.49
PCGF3-213ENST00000620529 MRAP2Q96G30 205 aa12.02□□□□□ -0.49
PCGF3-213ENST00000620529 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 EGFEM1PQ0D2K5 195 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 LAMTOR2Q9Y2Q5 125 aa12.01□□□□□ -0.49
PCGF3-213ENST00000620529 RRN3P1Q2M238 152 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 ZNF705AQ6ZN79 300 aaPredicted RBP12□□□□□ -0.49
PCGF3-213ENST00000620529 RNASE8Q8TDE3 154 aaKnown RBP12□□□□□ -0.49
PCGF3-213ENST00000620529 C16orf74Q96GX8 76 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 JPT2Q9H910 190 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 A0A087WWL8 130 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 S100A12P80511 92 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 PIK3CD-AS1Q5SR53 167 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 FAM74A4Q5TZK3 123 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 RNASEKQ6P5S7 137 aaKnown RBP12□□□□□ -0.49
PCGF3-213ENST00000620529 PTH2Q96A98 100 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 TMEM18Q96B42 140 aa12□□□□□ -0.49
PCGF3-213ENST00000620529 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms