RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 TMEM70Q9BUB7 260 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 GTSF1LQ9H1H1 148 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 MED28Q9H204 178 aa8.03□□□□□ -1.12
UPF3B-204ENST00000619445 BORCS7-ASMTA0A0B4J1R7 106 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 EIF3GO75821 320 aaKnown RBP eCLIP8.02□□□□□ -1.13
UPF3B-204ENST00000619445 S100A4P26447 101 aaKnown RBP8.02□□□□□ -1.13
UPF3B-204ENST00000619445 XGP55808 180 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 TOR2AQ5JU69 321 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 ATP6V0E2Q8NHE4 81 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 BATF3Q9NR55 127 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 ALG5Q9Y673 324 aa8.02□□□□□ -1.13
UPF3B-204ENST00000619445 A0A087WWC5 75 aa8.01□□□□□ -1.13
UPF3B-204ENST00000619445 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
UPF3B-204ENST00000619445 SEC11BP0C7V7 166 aa8.01□□□□□ -1.13
UPF3B-204ENST00000619445 ZNF506Q5JVG8 444 aa8.01□□□□□ -1.13
UPF3B-204ENST00000619445 PRNTQ86SH4 94 aa8.01□□□□□ -1.13
UPF3B-204ENST00000619445 TRAV8-3A0A0A6YYJ7 113 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 FABP5P3A8MUU1 101 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 GGTLC3B5MD39 225 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 FAM229AH3BQW9 127 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 IFNA7P01567 189 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 IGLV2-11P01706 119 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 C1QBP02746 253 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 GIPP09681 153 aaPredicted RBP8□□□□□ -1.13
UPF3B-204ENST00000619445 INAFM2P0DMQ5 153 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 ASIPP42127 132 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 ZNF80P51504 273 aaPredicted RBP8□□□□□ -1.13
UPF3B-204ENST00000619445 FGF8P55075 233 aaPredicted RBP8□□□□□ -1.13
UPF3B-204ENST00000619445 KRTAP10-1P60331 282 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 HIST1H2BAQ96A08 127 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 SGK494Q96LW2 274 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 C11orf21Q9P2W6 132 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 COX11Q9Y6N1 276 aa8□□□□□ -1.13
UPF3B-204ENST00000619445 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 PGPEP1LA6NFU8 196 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 RHODO00212 210 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
UPF3B-204ENST00000619445 Q5VSD8 79 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 SYT8Q8NBV8 401 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 IL36BQ9NZH7 164 aa7.99□□□□□ -1.13
UPF3B-204ENST00000619445 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
UPF3B-204ENST00000619445 DPPA3Q6W0C5 159 aa7.98□□□□□ -1.13
UPF3B-204ENST00000619445 Q8N814 137 aa7.98□□□□□ -1.13
UPF3B-204ENST00000619445 PARLQ9H300 379 aa7.98□□□□□ -1.13
UPF3B-204ENST00000619445 Q9HAA7 133 aa7.98□□□□□ -1.13
UPF3B-204ENST00000619445 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
UPF3B-204ENST00000619445 SRRM2Q9UQ35 2752 aaKnown RBP7.98□□□□□ -1.13
UPF3B-204ENST00000619445 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 PEX7O00628 323 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 DNLZQ5SXM8 178 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 RMI2Q96E14 147 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 ARL2-SNX15V9GYD0 113 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 B4DEV8 164 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 IGHV3-30P01768 117 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 IGHV3-30-3P0DP02 117 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 IGHV3-30-5P0DP03 117 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 FUSP35637 526 aaKnown RBP eCLIP7.97□□□□□ -1.13
UPF3B-204ENST00000619445 AKR1C8PQ5T2L2 129 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 COX8CQ7Z4L0 72 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 URGCP-MRPS24S4R325 110 aa7.97□□□□□ -1.13
UPF3B-204ENST00000619445 IGKV3D-20A0A0C4DH25 116 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 FAM162BQ5T6X4 162 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 RPL7L1Q6DKI1 246 aaKnown RBP7.96□□□□□ -1.14
UPF3B-204ENST00000619445 Q6ZSN1 163 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 Q86TA4 180 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 OR11H4Q8NGC9 324 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 STOML3Q8TAV4 291 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 FMC1Q96HJ9 113 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 LINC00479Q96M42 142 aa7.96□□□□□ -1.14
UPF3B-204ENST00000619445 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
UPF3B-204ENST00000619445 FXYD6-FXYD2A0A087WZ82 144 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 LINC00694P0DN24 101 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 FHITP49789 147 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 UBE2G1P62253 170 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 ELOBQ15370 118 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
UPF3B-204ENST00000619445 TRAV34A0A0B4J273 112 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 TRBV10-1A0A0K0K1A3 114 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 TRBV6-1A0A0K0K1D8 114 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 RNF222A6NCQ9 220 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 GAGE12JA6NER3 117 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 TPT1P13693 172 aaKnown RBP7.94□□□□□ -1.14
UPF3B-204ENST00000619445 GAGE1Q13065 139 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 GAGE4Q13068 117 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 GAGE5Q13069 117 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 KCNIP4Q6PIL6 250 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 OR2T35Q8NGX2 323 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
UPF3B-204ENST00000619445 KRBOX1C9JBD0 128 aa7.93□□□□□ -1.14
UPF3B-204ENST00000619445 H3BVH4 76 aa7.93□□□□□ -1.14
UPF3B-204ENST00000619445 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
UPF3B-204ENST00000619445 ARMS2P0C7Q2 107 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms